Rhizobium johnstonii: pRL110413
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Entry
pRL110413 CDS
T00402
Symbol
rhaS
Name
(GenBank) rhamnose periplasmic binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
pRL110413 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL110413 (rhaS)
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
pRL110413 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
CAK03366
UniProt:
Q1M5X3
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All DBs
Position
pRL11:complement(447839..448861)
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AA seq
340 aa
AA seq
DB search
MSIKWEDESMKLAKKLAIGVAFAVAMMAGTASAADIKIGLVVKSLGNGFFDAANKGAQEA
AKELGGVEVIYTGPTTTTAEGQIEVINSLIAQGVSAIAVSANDPDALVPALKKATQRGIK
VISWDSGVAPEGRILQLNPSSNELIGKMCLTLVKDHLDGGKGDFAILSATTTSTNQNIWI
DQMKKQLKDFPGLNLVTTVYGDDLSDKSYREAEGLLKANPNIKVIVAPTTVGVLAASKVV
EDKGLVGKVYVTGLGLPSEMAGAIKSGATKEFAIWNPIDLGYSATQIAYRLVKGETDGKP
GSEIEAGRMGKIKVGDNGEAAMADPFVYNATNIDQFSKVF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaatcaagtgggaggatgaaagcatgaaactcgcaaagaaactcgcaatcggcgtg
gcatttgccgttgccatgatggccgggacagccagcgctgccgacatcaagatcggtctc
gtcgtcaagtcgctcggcaacggcttcttcgatgctgccaacaagggtgcgcaggaagcc
gccaaggaactcggcggcgtcgaggtcatctataccggtccgacgacgacgaccgccgaa
ggccagatcgaagtcatcaattcgctgatcgcccaaggcgtcagtgccatcgccgtttcg
gccaacgatcccgacgcgctcgttccggcgctgaagaaggctacacagcgcggcatcaag
gtcatctcctgggattccggcgtcgcacctgaaggccgtatcctgcagctcaacccgtcg
tccaacgagttgatcggcaagatgtgcctgacgctcgtcaaggaccatctcgacggcggc
aagggcgacttcgccatcctgtcggccacgaccacctcgaccaaccagaacatctggatc
gaccagatgaagaagcagctcaaggatttcccgggcctcaacctcgtcaccacagtctat
ggcgacgacctctcggacaagtcctatcgtgaagccgagggcctgctgaaggcgaacccg
aacatcaaggtcatcgtcgctccgacgacggtcggcgttctcgccgcatcgaaggttgtc
gaagacaagggcctggtcggcaaggtctacgtcaccggtctcggcctgccgtccgaaatg
gccggcgcgatcaagtcgggcgccacgaaggaattcgccatctggaacccgatcgatctc
ggctactccgcaacgcagatcgcctatcgcctcgtcaagggcgagaccgacggcaagccg
ggcagcgagatcgaagccggccgcatgggcaagatcaaggtcggcgacaacggtgaagcc
gccatggccgatcccttcgtctacaatgctacgaacatcgaccagttctccaaggtcttc
tga
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integrated database retrieval system
