Rhizobium johnstonii: pRL110491
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Entry
pRL110491 CDS
T00402
Name
(GenBank) putative choline dehydrogenase
Organism
rle
Rhizobium johnstonii
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
FAD_binding_2
Pyr_redox_2
NAD_binding_8
DAO
HI0933_like
Pyr_redox
Lycopene_cycl
ApbA
Amino_oxidase
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CAK03444
RhizoBase:
pRL110491
UniProt:
Q1M5P5
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Position
pRL11:complement(529443..531236)
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AA seq
597 aa
AA seq
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MSDGPTHDYIVIGSGAGGAVVAARLAEEGRTVLVIEAGGDPLAKADDGTDMPLADASRVP
AFHAFASEHPGMTENHWVRHYENQEMQERDWRYSKEKDGVLYPRVRGLGGCTAHHAMIVV
RPNHCDWNHIFAVTGDESWKAPHMQGYFERIERCRYRFFLWRWLAAATGLNPTGHGWWGW
MTTERAVPLRALRDWPLWRALLRCVGAAADAFGKRGSDWETTEIDPNDHRNWNVGACGVR
VTPLSTRRHTRHGPRERLLDVIKRHPDRLTLRLNTTVTRIEFDGKRAVAVRCIDGEGREE
VIRAGREIILAGGAFASPQLLMLSGIGDPGHLDEHGIPVVEALPDVGRNLQDRYEVGVVS
RMKEPWSALKGVTYTTRDVHYRRWRRFRIGNYTSNGVMFSLTLKSRNTLPEPDLHCFSLL
ADFRGYFPRYSARIRKPDYMTWAILKAYTENQGGTVRLRSADPAALPAVVFHSFFEGTGD
YDLDLDAVVHAIRFVRKVNDAMDDLIASEEEPGRQNESDEALRRYVAENAWGHHACGTCA
IGPREDGGVLDSRFRVHGIEGLRVVDASVFPRIPGYFLATAVYMIAEKAADVILADS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgggccgacccacgattatatcgtcatcggcagcggcgccggtggcgccgtc
gtcgccgcgcggctcgccgaagagggccggacggtgctcgtcatcgaagccggcggcgat
ccgctggccaaagccgacgacggcaccgacatgccgcttgccgatgcctctcgcgtaccg
gcctttcacgcctttgcctccgaacatcccggcatgaccgagaaccattgggtgcgccac
tatgaaaatcaggagatgcaggagcgcgactggcgctacagcaaggaaaaggacggcgtg
ctgtatccgcgcgtgcgcgggctcggcggctgcaccgctcatcatgcgatgatcgtcgtg
aggcccaatcattgcgactggaaccacatctttgcggtcaccggcgacgaaagctggaag
gccccgcacatgcagggctatttcgagcgcatcgagcgctgccgctaccgcttcttcttg
tggcgctggcttgccgccgcaacgggcctcaatccgacgggccatggatggtgggggtgg
atgaccacggagcgcgccgttccgctgcgggccttgcgcgactggccgctgtggcgggcg
ctgctgcgctgcgtcggcgcggcggccgacgccttcggcaagcggggctccgactgggag
acgaccgagatcgacccgaacgaccaccgcaactggaacgtcggcgcctgcggcgtgcgc
gtcacaccgctttcgacgcgccgccacaccaggcacgggccgcgcgagcggctgctcgac
gtgatcaagcggcaccccgaccgcctgacgcttcgcctcaacaccaccgtcacgcgcatc
gaattcgacggcaagcgggcggtggcggttcgctgcatcgacggggaggggcgcgaggag
gtcattcgggccggtcgcgaaatcatccttgccggcggcgccttcgcctcgccgcagctt
ctgatgctctccggcatcggcgatcccggccatctcgacgagcacggaattcccgtcgtt
gaagcgcttcctgacgtcggacggaacctgcaggaccgctacgaggtcggcgtcgtcagc
cggatgaaagaaccctggtcggccctcaagggcgtgacctatacgacccgcgatgtccat
taccggcggtggcgcagattccgcatcggcaactatacgagcaacggcgtcatgttttcc
ctgacgctcaaatcccgcaacacgctgccggaaccggacctgcattgcttttcgctgctg
gccgatttccgcggctattttcctcgttattccgcgcgcatccgcaagccggattacatg
acatgggcgatcctcaaggcctataccgaaaaccagggtggaacggtgcggctgagaagt
gccgatcccgcggccctgcctgccgtcgtgtttcattccttcttcgaaggaaccggcgat
tacgacctcgatctcgatgccgtcgtccatgccatccgcttcgtcaggaaggtcaacgat
gcgatggacgatctcatcgcaagcgaagaggagcccggccggcagaacgagagcgacgag
gcgcttcgccgctatgtcgcggaaaacgcctggggccatcatgcctgcggcacctgcgcc
atcggcccccgcgaggatggcggcgtgctcgacagccgcttcagggtgcacggcatcgaa
ggcctgcgcgtcgtcgatgcttccgttttcccccgcattcccggctacttccttgccacc
gccgtctacatgatcgcggagaaggcggcagacgtcattctcgccgacagctga
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