Rhizobium johnstonii: pRL110524
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Entry
pRL110524 CDS
T00402
Name
(GenBank) putative exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
rle
Rhizobium johnstonii
Pathway
rle03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
pRL110524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rle03400
]
pRL110524
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
pRL110524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CAK03477
UniProt:
Q1M5L2
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All DBs
Position
pRL11:complement(565773..566561)
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AA seq
262 aa
AA seq
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MLIESSGILSKPVDHKSRIRVVDLETAGNGVNDVCEIGWQDVVLGHDGGWRVDDERGSLL
VNPGRPISPETMAIHHILDAEVATAPFWKEIASSVLRPEGGVIALAAHRASFEQRYCTPR
FTGGAAWICTWKCALRLWPELPRFSNQLLRYLRLPEGLVHAIGLPAHRAMPDAYVTAHHL
RDMLNESTFEQLVKWSSEPGLLPRVPSGHERGKSWDRLDIAALQAFARDRDADVRFSAET
ELRRRGDAEVKVADEAEQGTLL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttgattgaaagcagtgggatcctatcaaaacccgtagatcataaatctcgcatccgg
gtcgttgacctcgaaacagccgggaatggcgtaaatgatgtttgcgagatcggatggcag
gacgtcgtgcttggccatgatgggggatggcgggttgatgatgagcgcggatcattgctt
gtaaatcccgggcgaccgatctctcctgagacgatggccatacatcacatcttggacgct
gaggtcgcgacggcacctttttggaaagaaatcgcctccagcgtcttacggccggaaggt
ggagtgatcgcactggctgcacatcgggcaagtttcgagcagcgctattgcacccccaga
tttaccggcggagcggcctggatatgtacgtggaaatgcgcgcttcggctgtggcctgaa
ctgccgaggttctccaaccagctgcttcgatatctgcgtttaccggagggactggtgcac
gcgattggccttcccgcccaccgcgcaatgcccgatgcgtacgtaaccgcacatcatttg
cgggatatgttgaatgaatccaccttcgagcaactggtgaaatggagcagcgagccgggt
cttttgccacgagtaccttcaggccacgagcgtggcaaaagctgggatcggctggatatt
gcggcattgcaggcgttcgctcgcgatcgggatgccgacgtccgcttcagtgcggagacg
gaacttcgccgccgtggcgacgcggaggtaaaagtggctgacgaagccgaacaaggaaca
ctgctttag
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