Rhizobium johnstonii: pRL120104
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Entry
pRL120104 CDS
T00402
Name
(GenBank) putative LysR family transcriptional regulator
Organism
rle
Rhizobium johnstonii
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Pab87_oct
HTH_5
HTH_50
HTH_34
Motif
Other DBs
NCBI-ProteinID:
CAK11818
UniProt:
Q1M4Z9
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Position
pRL12:99541..100443
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AA seq
300 aa
AA seq
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MQFKRNEIHELSIFLAIVQYRSFRKAADHLEVTASALSHSMKALEQRLGVRLLNRTSRSV
APTAAGTALAEKISAGLELINSGLEDLNGHYQGGAGSIRINVLKDAAVLLLRPAIPVFQQ
RFPNVELEVAVDDQFVDVTADGFDAGIRYSGTIPEDMIAVPLTPPLKWVAVAAPDYLRSH
GRPVMPEDLNSHHCIRIRTGRGQIYKWEFERGDDRREIDVPGALISGETDLAINAALEGA
GLCYCLERLASPYVSAGRLEVVLPKWASIGPPFSMYYSSRRQLPFGVDALIKIVRGLNGF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcaagcgcaatgaaattcacgaactgtcgatctttctcgcgatagtccagtac
cgtagctttcggaaagcggcggatcacctggaagtaacggcttccgccctgagccacagc
atgaaggcgcttgagcaaaggctgggcgttcgcctccttaatcgaaccagccgcagcgtt
gcaccaaccgccgccggaacagccctcgccgagaagatttctgccgggctcgagcttatc
aactccggattggaggacttgaacggacattatcaaggtggcgccggcagcattcgcatc
aatgttctgaaagatgccgccgttctgcttttgcggccagccatcccggtgttccagcag
cgcttcccgaatgttgaactcgaggtcgccgtggatgaccagttcgtcgatgtcaccgcg
gacggcttcgatgccggtatccggtacagcggcaccatcccggaagacatgatcgcagtt
cctctcactcctcctttaaagtgggtcgcggtcgctgcccctgattatctcagaagtcat
ggtcgccctgtcatgccggaggacctcaattcccaccactgcatccggatacggacgggc
cgcggccagatctacaagtgggaattcgaacgcggcgatgaccggcgcgagatcgacgtt
cccggagcgctgatatcaggcgaaaccgatcttgccatcaatgcggctctggaaggcgcc
gggctgtgctattgcctggaacggttggcaagcccctacgtttccgcaggccgtctggaa
gtcgttcttcccaaatgggcatcgataggcccgccgttttcgatgtattattccagccgg
cggcagcttcccttcggcgtcgacgcgctgatcaagatcgttcgcggcttgaacggattt
tag
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