Rhizobium johnstonii: pRL120170
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Entry
pRL120170 CDS
T00402
Name
(GenBank) putative permease component of ABC transporter
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
pRL120170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL120170
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
pRL120170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
CAK11883
UniProt:
Q1M4T8
LinkDB
All DBs
Position
pRL12:complement(170669..171526)
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AA seq
285 aa
AA seq
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MNAGAKKRFGPLLLIAPAAILLGFFLVLPYLNIIVMSFRVPGQGTPYAPGFTTGNYSKFF
SDIFYISQMVNTLWIGFVTTFACLILGYPVAWQLARGTSAIRSLGYGLVLSPLLVGIVIR
SYGWTILLGNNGLINRALAGWGVIDGPLPLMYNALGIVIALVHVFLPFMILPIMSAIQGI
DPSLESAARSLGASKFKAFRRITLPLSLPGIQAGCILVFVLSLSAYVTPSLIGGLRVKTM
AVTVVDALIDTFQWPFGSALALMLSVTGAIVVVIFGRLTVMKWKA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaggcgccaaaaaacggttcgggccgctgctgttgatcgcgcccgccgcgatc
ctgctcggcttctttctcgtgctgccgtatctcaatatcatcgtgatgagctttcgcgtg
cctgggcagggcacgccctatgcgccgggctttaccaccggcaattacagcaagttcttc
tcggacatcttctacatcagccagatggtcaacacgctgtggatcggcttcgtcaccacg
tttgcctgtctgattctaggctatccggtggcctggcagctggcgcggggtacatctgcg
atccgctccctcggctacggactggtgctctcaccacttctggtcggcatcgtgattcgc
agctacggctggacgatcctgctcggcaataacggcctgatcaaccgggcgctggctggc
tggggcgtgatcgatgggccgctgccgctgatgtacaatgccctcggcatcgtcattgcg
ctggtgcatgtattcctgcccttcatgatcctgccgataatgagcgcgatccagggcatc
gatccctcgctggaatcggccgctcgttcgctcggtgcctccaagttcaaggccttccgg
cgcatcacactgccgttgtcgctgcccggcattcaggccggctgcatcctggtgttcgtg
ctgtcgctaagtgcctatgtgacgccttcgctgatcggcggccttcgggtcaaaaccatg
gcggtgacggtggtcgatgccctgatcgacacgttccaatggccgttcggttccgcgctg
gcgctgatgttgtcggtcacaggcgcgatcgtggtggtcatcttcgggcggctgaccgtc
atgaaatggaaggcataa
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