Rhizobium johnstonii: pRL120284
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Entry
pRL120284 CDS
T00402
Name
(GenBank) putative ABC transporter component
KO
K10439
ribose transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
rle02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
pRL120284
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
pRL120284
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL120284
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
pRL120284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
WH2_Lhr
Motif
Other DBs
NCBI-ProteinID:
CAK11996
UniProt:
Q1M4H6
LinkDB
All DBs
Position
pRL12:301295..302311
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AA seq
338 aa
AA seq
DB search
MTIRKMLLASAAIACAAMPVSAFAETSAKKIALSNNYAGNSWRQAMLTSWGKVTGEAVKA
GTVAAADPFTTAENQATEQAAQIQNMILQGYDAIVLNAASPTALNGAVKEACDAGIIVVS
FDGIVTEPCAWRIAVNFKEMGRSEVEYLSKKLPDGGNLLEIRGLAGVFVDDEISAGIHEG
VKQFPQFKIAGSVHGDWAQDVAQKAVAGILPSLPDIAGVVTQGGDGYGAAQAIAATDRKM
PIIIMGNREDELKWWKEQKDAKSYETMSVSIAPGVSTLAFWVAQQILDGKEVKKDLVVPF
LRIDQDNLETNLANTQAGGVANVEYTQADAIKVIESAK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccgtaagatgcttctggcatcggccgctattgcttgcgccgcgatgcccgtt
tccgcctttgccgagacatcggccaagaagatcgccctttccaacaactatgccggcaac
tcgtggcggcaggccatgctgacgagctggggcaaggtgacgggcgaagccgtgaaggcc
ggcaccgttgccgcagccgaccctttcaccaccgccgagaaccaggcgacggagcaggcc
gcgcagatccagaacatgatcctgcagggttatgacgccatcgtgctgaacgccgcctcg
ccgacggcgctgaacggtgcggtcaaggaagcctgcgatgccggcatcatcgtcgtgtcc
ttcgacggcatcgtcactgaaccctgcgcctggcgtatcgcggtcaacttcaaggaaatg
ggccgcagcgaggtcgagtacctgtcgaagaaacttccggacggcggcaacctgctcgag
atccgcggccttgccggtgtctttgtcgacgacgaaatctcggcgggcatccacgagggt
gtcaagcagttcccgcagttcaagattgccggctccgttcacggcgactgggcgcaggac
gtggcgcagaaggctgttgccggcatcctgccgagtctgcccgacatcgccggcgtggtg
acacagggcggtgacggctatggcgccgcacaggcgattgccgcaaccgaccggaagatg
ccgatcattatcatgggcaaccgcgaggacgaactgaagtggtggaaggagcagaaggac
gcgaagagctacgagaccatgtccgtatccatcgcgccaggcgtctccacactcgctttc
tgggtggcccagcagatcctcgacggcaaggaagtcaagaaggacctcgtcgtgcccttc
ctgcgcatcgaccaggacaatctcgaaaccaacctcgccaatacccaggccggcggcgtc
gccaacgtggaatacacgcaggcagacgcaatcaaggtcatcgagtcggcaaagtaa
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