Rhizobium johnstonii: pRL120300
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Entry
pRL120300 CDS
T00402
Symbol
yagR
Name
(GenBank) putative xanthine dehydrogenase YagR, molybdenum binding subunit
KO
K11177
xanthine dehydrogenase YagR molybdenum-binding subunit [EC:
1.17.1.4
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00230
Purine metabolism
rle01100
Metabolic pathways
rle01120
Microbial metabolism in diverse environments
rle01232
Nucleotide metabolism
Module
rle_M00958
Adenine ribonucleotide degradation, AMP => Urate
rle_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
pRL120300 (yagR)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
pRL120300 (yagR)
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GFIT
Motif
Pfam:
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
DUF2271
Motif
Other DBs
NCBI-ProteinID:
CAK12012
UniProt:
Q1M4G0
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All DBs
Position
pRL12:complement(317349..319547)
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AA seq
732 aa
AA seq
DB search
MQFDTPATTNPIDNLKVVGQPIHRIDGQLKTTGRAMYAYEWHDPNMSYAYGYPVGAAIAK
GRITSMDVSAAKKAPGVLAVVTTLDIGERKKGRFNTAKLFGGDEVQHYHQAIAVVVAETF
EQARAAASLVKVDYAEEKGVFDLGQAKDSAVKPDESQQPDTAVGDFEAAFRSAPVTVDAS
YTTPDQSHAMMEPHASIAAWNGDEVTVWTSSQMIDWWRSDLATTLDIDKENIHLMSPFIG
GGFGGKLFLRADAVLAVVGARAVKRPVKVALPRPLLINNTTHRPATIQRIRIGTERDGKI
TAIAHESWSGDLPGGGLETAVNQTRLLYAGANRMTAMRLATLHLPEGNAMRAPGEAPGLM
ALEIAIDEIAEKVGIDPVQFRIVNDTQVDPEKPQRPFSQRNLVGCLTLGAERFGWRERGK
PGSRRDGSWLVGMGVAVAFRNNLVLPSGARVKLDREGVVTVETDMTDIGTGSYTIIAQTA
AEMMGVTIDKVAVQLGDSRFPVSAGSGGQFGANSSTSGVYAACVKLREAIAKKLGFNSED
IVFENGEVRSGNRSVPLAEAAGPDGLVGEDTIKWGELTETHQQSTFGAHFVEVGVDIATG
ESRIRRMLAVCAAGRILNPITARSQVIGAMTMGAGGALSEELAVDTRRGFFVNHDLASYE
VAVHADIPHQEVIFMDETDPMSSPMKAKGVGELGLCGVAAAIANAVYNATGVRVRHYPLT
LDKLIGGLPDVA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcgatacgccagcgacaaccaacccgatcgacaatctgaaggtcgtcggccag
ccgatccaccgcatcgatggtcagctcaagacgaccggccgcgcgatgtacgcctatgag
tggcacgatccgaatatgtcctacgcctacggttatcccgttggcgcggccatcgccaag
ggccgcatcacgtccatggacgtttccgccgccaaaaaggctccgggcgtgcttgccgtc
gtgacgacgctcgatatcggcgagcggaagaagggcaggttcaacaccgccaagcttttc
ggtggcgacgaggttcagcactatcaccaggcaatcgcggtcgtcgtcgccgagaccttc
gagcaggcacgcgccgcagcctccctggtcaaggtcgactatgccgaagaaaagggtgtg
ttcgatctcggtcaggcaaaggattcagccgtcaagccggatgaatctcagcagcccgat
acagcggtcggcgacttcgaggctgccttcaggtcagctcccgtcactgtcgacgcgtct
tacacgacgcccgaccagtcgcatgcgatgatggagccgcacgcatcgatcgcagcctgg
aacggcgacgaggtgaccgtctggacctccagccagatgatcgactggtggcgctccgac
cttgcaacgacgctcgacatcgacaaggagaatatccacctcatgtcgccgttcatcggc
ggcggcttcggcggcaagctgttcctgcgggcggatgccgtgctggccgttgtcggtgcg
cgtgcggtcaagcggcccgtcaaggtcgccttgcctcgccccctcctgataaacaacacc
acccatcggccggcgacgatccagcggatccgcattggaaccgagcgtgacggcaagatc
actgccattgcgcacgaaagctggtccggcgaccttccgggcggcggactggagaccgcc
gtcaaccagacgcggctcctctatgcgggtgcaaaccggatgaccgcaatgcgtcttgcg
acgcttcatctcccggagggcaatgccatgcgcgctccgggcgaagcccccggactgatg
gcgctcgaaatcgccatcgacgagattgccgaaaaagttgggatcgatcctgtacaattt
cggatcgtcaacgacacgcaggtcgatccggaaaagccgcagcggcctttttcccagcgc
aatctcgtcggctgcctcacactaggtgcggagcggtttggctggcgtgaaagaggaaag
ccgggttccagacgggatggcagctggctggtcggcatgggcgtcgccgttgccttccgc
aacaacctcgtccttccctccggagcccgggtaaagctcgaccgggaaggcgtcgtgact
gtggaaaccgacatgaccgacatcggaaccggcagctacacgatcatcgcccagacggcg
gccgagatgatgggggtcacgatcgacaaggtcgccgtccaactcggcgactcgcgtttt
ccggtttctgcgggttccggcggacagttcggtgcgaactcttccacgtctggcgtctac
gcagcctgtgtcaagctgcgtgaggccatcgccaagaagctcggcttcaactccgaagac
atcgtcttcgagaatggcgaggtccgctcgggcaatcgttcggtgcctcttgccgaagcc
gccggtccggatggccttgtcggcgaagacaccatcaagtggggcgagctcaccgaaacg
catcagcaatcgacattcggcgcgcacttcgtcgaggttggcgtcgacattgccactggg
gaaagccggatccgcaggatgctcgcagtctgtgcggcgggaagaatccttaatccgatc
accgcccgaagccaggtcatcggcgcgatgacgatgggggcgggcggcgcgctgtccgag
gaattggcggtcgacacccgtcgcggcttcttcgtcaaccacgatctcgccagctatgaa
gtggcggtgcatgccgacattccgcaccaggaggtgatcttcatggacgagaccgatccg
atgtcctcgccgatgaaggcaaagggcgtcggcgagcttggcctttgcggcgtcgcggca
gcaatcgccaacgccgtctataacgcgaccggcgtcagggtccggcactatccgctgaca
cttgacaagctcatcggtggcttgccggatgtggcctga
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