Rhizobium johnstonii: pRL120404
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Entry
pRL120404 CDS
T00402
Symbol
braC2
Name
(GenBank) putative substrate-binding component of ABC transporter
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
pRL120404 (braC2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
pRL120404 (braC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL120404 (braC2)
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
pRL120404 (braC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
CAK12113
UniProt:
Q1M459
LinkDB
All DBs
Position
pRL12:437179..438372
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AA seq
397 aa
AA seq
DB search
MKLTVSRRALFISTAVLSLAVTVSGLPAIALAADGTIKLGLVAPMSGPNARYGAFSMHGA
ELAVKDINDAGGIDGMKIELLNADSQGTPVEGVSAARRLIDQDGVDFIIGDVSSSVTLAI
QPVAEDAEVLLLNAASSNPKITYQAGVGGFKWTYRNYPTDENRALIVAKYAAEQRGFTKF
AVLSVDSDYGRSAITFTKKYLPDFKGEILSEDYYKEGEVDFRSVLAKIRDNGAQAIIMYG
LADTTPIIARQMIELGIAGKVALIGNGEFNTEKTIKSAPSALEGAVEAAAWLPQFDSPES
KAFVEKFTATYNEAPNNHAYVHWDTVNLLAAAIKQAGSADKVKVRDALSKIKYKSPVGEV
TFDDHNQARLPMILLQIENGKPSIKGAYTADIQYPAN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaccgtaagccgcagagcacttttcatttctacagcggtcctttcgctggcc
gtgaccgtctccggcctgccggctatcgcgctggcagcggacgggacgatcaagctcgga
cttgtcgcgccgatgagcggtccgaatgcgcgctacggcgcattttcaatgcatggagcc
gaactcgccgtcaaagacatcaatgatgccggcggcatcgacgggatgaaaatcgaactc
ctcaacgccgacagccagggcacgccggtcgaaggcgtttcggccgcccgtcgtttgatt
gaccaggatggcgtcgacttcatcatcggcgatgtttccagctcggtgacgcttgccatc
cagcccgtcgcggaagatgccgaagtgcttctcctgaatgcggcctcatccaatccgaag
atcacctatcaggccggtgtcggcggtttcaagtggacctatcgcaactatccgacagat
gagaaccgggcgctgatcgtcgccaaatatgccgcagaacagcgcggcttcaccaagttc
gcggtgctctcggtcgacagcgactatggccgctcggcgatcaccttcacgaagaagtac
ctgcccgatttcaagggtgagatcctcagcgaagactattacaaggaaggcgaagtcgac
ttccgcagcgttctcgccaagatccgcgacaatggcgcccaggcgatcatcatgtacggc
ctcgccgatacgacgcccatcatcgcccgccagatgatcgaactcggaatagccggcaag
gtcgcgctgatcggcaatggcgagttcaacacggaaaagaccatcaaatcagccccgtcg
gcgctcgaaggtgccgtcgaagccgccgcatggcttccgcagttcgactcgcctgaaagc
aaggctttcgtcgagaagttcactgccacctacaacgaagccccgaacaaccacgcctac
gttcactgggataccgtcaacctcctcgccgcggcgatcaagcaggccggcagtgctgac
aaggtgaaggttcgcgatgcactctcgaagatcaagtacaagagcccggtcggcgaagtc
actttcgacgaccacaaccaggcccgcctgccgatgatcctactgcagatcgagaacggc
aagccgagcatcaagggtgcatataccgcggacattcaatatcctgccaactaa
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