Rhizobium johnstonii: pRL120461
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Entry
pRL120461 CDS
T00402
Name
(GenBank) putative capsule polysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
pRL120461
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL120461
Transporters [BR:
rle02000
]
Other transporters
Pores ion channels [TC:
1
]
pRL120461
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
SLBB
DUF5077
Motif
Other DBs
NCBI-ProteinID:
CAK12170
UniProt:
Q1M403
LinkDB
All DBs
Position
pRL12:495175..496314
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AA seq
379 aa
AA seq
DB search
MRKLAPLVLVAVLSACARPSDGPTAGGFYNATAPQSNERIPVVRLSEAPMGPVAATPLAY
AATDPGLSLMRSSGFADTRLRRGDVIEVTILDTGEEGLFSSTQSKTLNLGRFTVDSTGNV
TLPFVGKQRVVDSSTEALQTRIVTGLKGSAVNPQAVVTVVDRPSSGITVNGDVRAAGRFP
LTARKERVLDAVALAGGASSAPGSATVTLMRGKQRATVPLQRVIDDNKQNVYLLPDDQIY
VDKDSPTFTAFGAFKSVGEFEFEPGRLTLAQALGRAGGLLDDRADARNFYVLRSQPVFTQ
VAAANAKTPVPAVVSTKPVIYRVDLKDVSNLALMQRFQMMDGDIIYASNASLVDFAKLFN
VYQKSVPTAAAPIPGSSGN
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagttggcgccgctcgtccttgtcgcagttcttagtgcctgcgcccggccatcg
gatggcccaaccgccggtggtttctataatgccaccgcccctcagagcaacgagcggatt
ccggtcgtcaggctctcggaagcgccgatgggtccggttgcggccaccccgcttgcctat
gcggccaccgatcccgggctcagcctcatgcgctcgagcggatttgccgatacgaggctg
cgacgcggcgatgtcatcgaggtcacgatcctcgacaccggcgaagaggggcttttctct
tcaacccaaagcaagaccctcaatctcggccgcttcaccgtcgattccacgggcaacgtg
acccttcccttcgtcggcaaacagcgcgtggtggattcctcgaccgaggcgctgcagacg
cgcatcgtcaccggcttgaaggggtcggcggtcaatccgcaggccgtcgtcaccgtggtc
gacaggccctccagcggtatcaccgtcaatggcgacgtgcgtgccgccggtcgcttcccg
ctcacagcgcgcaaggagcgtgtactcgatgcggtcgcacttgccggcggcgcatcgtct
gcgccgggctcggcgaccgtcacgctgatgcgcggcaagcagcgcgccaccgtgccgctc
cagcgcgtcatcgacgacaacaaacagaatgtctaccttctgcccgacgaccagatctac
gtcgacaaggattcacccaccttcaccgctttcggcgccttcaagagtgtcggcgagttc
gaattcgagccgggcaggctgacgcttgcccaggcgctcgggcgagccggcggcctgctc
gacgatcgtgccgatgcgcgcaatttctatgtgctgcgcagccagccggtctttacgcag
gttgcggccgcaaatgccaagacccccgtgccggctgtggtgagcaccaagccggtgatc
tatcgcgtcgatctgaaggacgtttccaatctggcgctgatgcagcggttccagatgatg
gatggcgatatcatctacgccagcaacgccagcctggtggactttgccaagctcttcaac
gtgtaccagaaaagcgtgccgacggccgcagcaccgatcccggggtcgagcggcaattaa
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