Rhizobium johnstonii: pRL120515
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Entry
pRL120515 CDS
T00402
Symbol
qatW3
Name
(GenBank) putative permease component of ABC transporter
KO
K02001
glycine betaine/proline transport system permease protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
pRL120515 (qatW3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL120515 (qatW3)
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
pRL120515 (qatW3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
IncD
Motif
Other DBs
NCBI-ProteinID:
CAK12224
UniProt:
Q1M3V0
LinkDB
All DBs
Position
pRL12:complement(560100..560987)
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AA seq
295 aa
AA seq
DB search
MEWFYKFPHMDDDALRNLKKAIDDGFRAFTRTYGDAIESLFSPLQHFLIAADRFMTQTPW
PIITAIILVIAWFASRSLKVVLGCLVTLLLIGYFDMWDDTMRTVSMIFVCTVLSIAIGIP
MGILMARSDRLQRIINPILDVMQTMPSFVYLIPVVMLLGIGKVPGLIAVVIYAIPPMIRL
TDLGIRLVDKDVLEAADAFGTSSSQKLFKVQLPLALPTIMAGINQTIMMALAMVVVASMI
GVQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRVSQAYGKRLQKHREIVHG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggaatggttttataaattcccgcatatggatgacgacgcccttcgcaatctgaagaag
gcgatcgatgacggttttcgcgcatttacccgcacctatggcgacgcgatcgaaagcctc
ttctccccgctgcagcatttcctgatcgccgccgaccgcttcatgacgcagacgccgtgg
ccgatcattacggcaatcatccttgtcatcgcatggtttgccagccgcagcctgaaggtc
gtcctcggctgtctcgttacactgctgctgatcggctatttcgacatgtgggacgatacg
atgcggacggtctcgatgatcttcgtctgtaccgtgctgtccatcgccatcggcattccg
atggggatattgatggcgcgttccgaccggctgcagcgcatcatcaatccgatcctcgac
gtcatgcagaccatgccgagcttcgtctatctgatccctgtcgtcatgctgctcggcatc
ggcaaggtgccgggactgatcgccgtcgtcatctacgccatcccgccgatgataaggctg
accgacctcggcatccgcctggtcgacaaggacgtgctcgaggccgccgatgcgttcgga
acgtcgagttcgcagaagctgttcaaggtccagctgccgctggcgcttcccactatcatg
gccggcatcaaccagaccatcatgatggcgctcgccatggtcgtcgtcgcttcgatgatc
ggcgtccagggtcttggccagccggttctgaaggccatcgccaaccagtacttcaccctg
ggtattttcaacggccttgccatcgtcggcattgccatcatcttcgaccgggtcagccag
gcgtatggcaagcggctccagaagcatcgggagatcgtccatggctga
DBGET
integrated database retrieval system
