Rhizobium johnstonii: pRL120535
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Entry
pRL120535 CDS
T00402
Name
(GenBank) putative proline racemase
KO
K12658
4-hydroxyproline epimerase [EC:
5.1.1.8
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00470
D-Amino acid metabolism
rle01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
pRL120535
Enzymes [BR:
rle01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.8 4-hydroxyproline epimerase
pRL120535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_racemase
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CAK12244
UniProt:
Q1M3T0
LinkDB
All DBs
Position
pRL12:580451..581449
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AA seq
332 aa
AA seq
DB search
MRNSFFCIDAHTCGNPVRLVAGGGPLLLHAPISERREIFVRDHDWVRQALMFEPRGHDIM
SGAIIYPAYREDCDFAVLFIEVSGCLPMCGAGTIGTVTAAIEEGLVKPREPGRVAIETPA
GRVDVTYEEKGGYVETVRLHNVASYLHEADVEVDVPGMGRLRVDLSYGGNYYAVIEPQEN
WSGLDGMTASDIVGCSQKLRSALADICDPIHPDDARIRGVHHAIWCDLPVNDTSDGRCAV
FYGEKAIDRSPGGTGTSARMAQLYGKGRLTVGSRFRHESLIGTVFEGRVEAEARIGPYSG
ILPSIGGWARVIGHNTIFVDDRDPLAHGFQIR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacagcttcttctgtatcgatgcgcatacctgcggcaatcccgtccggctcgtc
gccggaggcggtccgctgcttctgcatgcgccgatcagcgagcgacgggagatttttgtc
cgggaccatgactgggtacgccaggcgctgatgttcgagccaagggggcacgacatcatg
tcaggcgcgatcatctatccggcctatcgggaggattgcgatttcgccgtgcttttcatc
gaagtgagtggctgtctgccgatgtgcggcgccggcaccatcggcaccgtgaccgccgcg
atcgaggaggggctcgtcaagccgcgggagcccggccgggttgccatcgagacgcctgca
ggaagggtcgacgtcacttatgaggagaagggcggatatgtcgaaaccgttcgtctccac
aatgttgcgagctatcttcatgaggctgatgtcgaggtcgatgtgccgggaatgggccgt
ctgcgcgtcgacctctcatatggcggcaactattatgcagtcatcgaacctcaggaaaac
tggagcgggctcgacggcatgaccgcatccgacatcgtcggttgcagccagaagctcagg
tcagcgcttgccgatatctgcgatcccattcatcccgacgacgccaggatccgcggcgtg
catcatgccatctggtgtgatctccccgtcaacgacacttcggatgggcgttgcgcggtc
ttctatggcgagaaggccatcgatcgctcgccgggcggcaccggcacttccgcccgcatg
gcccagctctatgggaagggacggcttaccgtcgggtcgagattccggcatgaaagcctg
atcggaaccgtcttcgagggccgggtcgaagccgaggcacgcattgggccttatagcggt
attcttccaagcatcggaggctgggcacgcgtcatcgggcacaacaccattttcgttgac
gatcgggatccgctagcgcatggctttcagatccgatga
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