Rhizobium johnstonii: pRL120565
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Entry
pRL120565 CDS
T00402
Symbol
traGp12
Name
(GenBank) putative transmembrane traG homologue/component of type IV secretion system
Organism
rle
Rhizobium johnstonii
Pathway
rle03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
pRL120565 (traGp12)
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Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
CAK12275
UniProt:
Q1M3P9
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Position
pRL12:complement(616570..618258)
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AA seq
562 aa
AA seq
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MMIHASQIKIAFANMMHMAARDPLWAIVAFISFPLRYARSFLKGAVGYVIVIVTVYFGID
YLRRVILGSSRGDVIWHIGDWIFMLFAVVLLIRFLSEPLITHFATASDADTHGSARFAGR
REIAPLTKAEGGLLIGRANNSGRLLRYSGPAHLLTMAPTRSGKGVGTIIPNLLTADRSII
CIDPKGENAKIAGEAREKFGPVHILDPFGVTGGPSAAFNPMDGVDKDSVDVAEDVSTLAD
ALVFDEPGLSGDAHWNEEAKALIAGLLLHVIASQSDDRRTLTTLRHLLTLAPEAFRAVLD
AMQDSDAVNGLVARAANRHLGKSDREASGVLSAAQRHTHFLDSPRMTEVLSRSDFRFGDL
KADKATVFLVLPPDRLAAYSRWLRLLVAQSLTEMARTAPSPHPSAPPVLYLLDEFAALGH
LAPIERAMGLMAGYGVQLWPIVQDIHQLRATYRQRAGTFLSNAGVLQVFGVNDHDSARLV
SDLLGQETVVFNTAARALDSEKSGLSFAEQHVGRPLLTPDEVRNMHAETELLFIAGQRPI
VATKLRYYADPEFSGLFTASQI
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgatgatccatgccagccagatcaagattgccttcgcaaacatgatgcacatggcggcc
cgcgatccgctctgggccatcgtcgcgttcatcagctttccgcttcgatatgccaggtcg
ttcctgaagggtgcggtcggctatgtcatcgtcatcgttaccgtctacttcgggatcgac
tacctcagacgcgtgatccttggcagcagcagaggtgacgtcatctggcatatcggcgat
tggatattcatgctttttgccgtcgtgctgcttatccggtttttgtccgagccgctgatc
acgcatttcgcgacagcgagcgacgccgacacgcatgggtcggcgcgctttgccggccga
agagagattgcgcctctgacaaaggcagaaggcggattgctgatcggccgtgcgaacaac
tccggccggcttcttcgctatagcggaccggctcatctgctcaccatggcgccgacgcgc
agcggcaagggtgtcggcaccatcatcccgaacctcttgacagccgatcgctcgatcatc
tgcatcgatccgaaaggcgagaatgcgaagatcgccggtgaggcacgagagaagttcggg
ccggttcatatcctcgatccgttcggcgtcaccggcggaccttcggctgccttcaatccg
atggacggcgttgataaagacagcgtcgatgtcgccgaagacgtctccaccttggccgac
gcactggtgttcgacgaacccggtctttcgggggacgcccattggaacgaggaagccaag
gcgctgatcgcgggattgctgctgcatgtgatcgccagccagtcggacgacaggcgcacg
ctgaccacgctcaggcatttgctgacgctggcgccagaagcgttccgtgccgtgctggac
gcaatgcaggacagtgacgcggtgaacggcttggtcgcccgtgccgccaaccgccatctc
ggcaagtcggatcgcgaagccagcggcgtgctgtcggcggcccagcgacatacgcatttc
ctcgacagtccgcgcatgaccgaggtgctgtcacgatcggattttcggttcggtgacctc
aaggcagacaaggcgaccgtgtttctggtcttgccgccagacaggcttgcggcctattcg
cgttggctgcgtttgctggtggcccagagcctgaccgagatggcgcggaccgcaccctcg
ccgcatccatccgcgccgcctgttctctaccttctcgacgagtttgccgcccttggtcat
ctggcgccgatcgaacgcgccatgggattgatggcaggctacggtgtgcaactctggcca
atcgtccaggacattcatcagctgcgcgccacctatcgccagcgcgccggcacgtttctg
tccaacgccggcgtgctgcaagtgttcggggtcaatgatcacgacagcgcccgtctggtc
tccgatctgcttggccaggagaccgtggtgttcaacacggcggcccgtgcactcgattcg
gaaaagagcggcctctcctttgccgagcagcatgtcggccgcccgctgctgacgcccgac
gaagtccgcaatatgcatgccgagaccgagctgctgttcatcgccggccagcggccgatc
gttgcgacaaagttgcgatattatgccgatccggaattttccggattgttcactgcatca
cagatctga
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