Rhizobium johnstonii: pRL120739
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Entry
pRL120739 CDS
T00402
Name
(GenBank) putative phospholipase
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00564
Glycerophospholipid metabolism
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
pRL120739
00565 Ether lipid metabolism
pRL120739
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
pRL120739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rle04131
]
pRL120739
Enzymes [BR:
rle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
pRL120739
Membrane trafficking [BR:
rle04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
pRL120739
Endosome - Golgi transport
Others
Others
pRL120739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
TSA
Motif
Other DBs
NCBI-ProteinID:
CAK12448
UniProt:
Q1M378
LinkDB
All DBs
Position
pRL12:complement(804678..806204)
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AA seq
508 aa
AA seq
DB search
MTTFETIFNNPSLPQTKSQRPGDGQKQEDSALSLEGSAAKAAFLINGNSYFAELARALRQ
ARRTIWIVGWDFNPNIRLEPDKSDETLADLLHALAAANPKLEIRILIWALGPVYSGKSLQ
PLRKKDFPRNVRIDLRFELQPTLRGCHHQKLVSIDDTVSFIGGIDLTSRRWDTWLHRAKD
KLRRDPKGVSYDPLHDVQAMVTGDAARLIGDIVRQRWENATGESHLPLAENVPFAWPDDL
AVSMREIAVSLAPTEPSTAFRPGVSDGIAMTLDVVARARRQLYIEAQYLASFRVADAIAA
RLQEEDGPEVVIICTRSSHGLIEKIVMGGNRDRVIRRLKRADRADRLRVYYAVVPGPIVP
GPVTAKESGEVEVLVHSKLIIADDELVRIGSSNLNNRSEGLDGECDMLFEAGNNEHRRAI
ADLRNCLLSEYLGTTPESFAAAIMQSGSLIQAVDALNDGPRGLREFTVELSGSISPISGT
AIFDPVRPFAVLNRLGLGTLVRRLIRPA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgacgacattcgaaaccatcttcaataacccgagcttgccccaaacaaaatcacaacgg
ccgggcgacggccaaaaacaggaggacagcgccttgtccctggaagggagcgctgccaag
gcggccttcctgatcaacggcaacagctatttcgcagagctggcgcgcgcgttgcggcag
gcgcggcgcaccatctggatcgtcgggtgggatttcaatccgaacatccggttggaaccc
gataagtcagacgaaacgctggccgacctgttgcatgccctggcagcggcaaatccgaag
ctcgaaatacgcatcctcatctgggcgctcggtcccgtttattctggcaagtccctgcag
ccgctgcggaagaaagactttcccaggaatgtgcggatcgatctgcgcttcgaacttcag
ccgacattgcgcggctgccaccatcaaaaactcgtctctatcgacgataccgtctccttc
atcggcggcatagacctgacgtcgcgccggtgggacacctggctccaccgcgccaaggat
aagctacggcgcgaccccaagggcgtttcctatgatccgctgcatgacgttcaggcaatg
gtcaccggcgacgccgccaggttgatcggcgatatcgtcaggcagcgctgggaaaacgcc
accggcgaaagccacctgccgctggccgaaaatgtccccttcgcctggccggacgatctc
gccgtttcgatgagggagatcgcggtcagcttggcgccgacggagccgtcgaccgctttt
cgccccggcgtcagcgacggcatcgccatgacattggacgtcgtcgcccgggcgaggcgg
cagctttacatcgaggcgcaatatctcgcctccttccgcgtcgccgacgccattgccgcg
cggctacaggaggaagacggccccgaagttgtcatcatctgcacgcgcagttctcatggg
ctgatcgaaaagattgtcatgggcggcaatcgcgaccgagtcatccgccgcctcaaacgc
gccgatcgcgccgatcgcctgcgcgtctactatgccgtcgtgcccgggccaatcgtgccc
gggccagtcacggcgaaagagagcggcgaggtggaggtgctcgtccattccaaactgatc
atcgccgatgacgagctggtccgcatcggctcctccaacctcaacaatcgctcggaaggg
ctggatggcgaatgcgacatgctgttcgaggccggcaacaacgagcatcgccgcgcgatc
gcggacctgcgcaattgcctgctttcggaatatctcggaaccaccccggaaagttttgcc
gcagccattatgcaaagcggctcgttgatccaggcggtcgacgcgctcaatgacgggcct
cggggtttacgggaattcaccgtcgagctgtcgggcagcatttcaccgatttcaggcacg
gcgatcttcgacccggttcgacccttcgcagttttaaaccgactgggcctcggcacgctc
gtccgccgcctcattcgccccgcgtga
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