Rhizobium johnstonii: pRL70019
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Entry
pRL70019 CDS
T00402
Symbol
hupA2
Name
(GenBank) putative DNA-binding protein Hu-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rle03032
]
pRL70019 (hupA2)
03036 Chromosome and associated proteins [BR:
rle03036
]
pRL70019 (hupA2)
03400 DNA repair and recombination proteins [BR:
rle03400
]
pRL70019 (hupA2)
DNA replication proteins [BR:
rle03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
pRL70019 (hupA2)
Chromosome and associated proteins [BR:
rle03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
pRL70019 (hupA2)
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
pRL70019 (hupA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CAK11544
UniProt:
Q1M9Z7
LinkDB
All DBs
Position
pRL7:complement(20221..20499)
Genome browser
AA seq
92 aa
AA seq
DB search
MTTTNEIADKIAGEHSLTKAQGKAIVEAVIASITEAAVAGNETSLPGFGKFKVKATPERE
ARNPSTGATIKVAAAKKLAFTPAKALKDALNK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaccaatgaaatcgccgacaagatcgccggcgaacacagcctcaccaaggct
cagggaaaggcgatcgtcgaagcggtgatcgcgtccatcaccgaagccgcggtggccggc
aacgagacctccctcccaggcttcggcaagttcaaggtgaaggcgacaccggagcgcgag
gcacgcaacccgtcgaccggggcgacgatcaaggttgccgcggccaagaagctggccttt
acgccggccaaggcattgaaggatgcgctgaacaagtaa
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integrated database retrieval system
