Rhizobium johnstonii: pRL80026
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Entry
pRL80026 CDS
T00402
Symbol
livJ
Name
(GenBank) putative branched-chain amino acid ABC transporter binding component
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
pRL80026 (livJ)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
pRL80026 (livJ)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL80026 (livJ)
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
pRL80026 (livJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
B12-binding
DUF6206
Motif
Other DBs
NCBI-ProteinID:
CAK02825
UniProt:
Q1M9I2
LinkDB
All DBs
Position
pRL8:26894..28153
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AA seq
419 aa
AA seq
DB search
MSDFTKRELLRVMALTMGALALTQPAWSEDQPIKIGSSMALSGPLAGGGRQSQLALQMWV
EDVNSRGGLLGRKVELVTYDDQGSPAQSPGIFSKLIDLDNADLLIAPYGTVPAAAVMPLV
KERGRLLIGQIGYQINSKVHHDMWFNNSPWNDAESWVGGFFKLGETVGVKKVAFLAADQE
FSQNILAGAKALAGKAGFETVYEQTYPPTTVDFSAMIRAIRAASPDMVFVASYPADSTAI
IRAVNEIGVGSSVKLFGGGMVGLQYASVMQALGSQLNGVVNYHTYVPEKTMAFPGVKEFL
DRYAEKAKAAKVETLGYYVAPFSYASGQILEQAVKATGSLDNAELAKYLRTNEVQTIVGP
IRWGTDGEWSQPRVVMVQFRDVKDGDAEQFRQEGKQVIVYPDKYKTGDLVSPLSGAQGR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattttacgaaacgcgaattgctccgcgtcatggctcttactatgggagccctg
gccttgacgcagcctgcctggtccgaggatcagccgatcaagatcggctcgagcatggcc
ttgtccgggccgcttgctggaggcggccggcaatcgcagcttgcattgcagatgtgggtg
gaggacgtcaattcgcgcggcgggcttcttggccgaaaggtggagctagtcacctatgat
gaccagggaagcccagcacagagccccggtattttttccaagctgatcgacctcgacaac
gccgaccttctgattgcgccctacgggaccgtgccggcggctgcagttatgccgctggtc
aaggaacgcggccggcttctgatcgggcagatcgggtatcagatcaattccaaggtccac
cacgacatgtggttcaacaattcaccttggaacgacgcggaaagctgggtcggcggcttc
ttcaagctcggcgaaacggtcggcgtcaagaaagtggcgttcctggcggcagaccaggag
ttttcccagaacatcctcgcaggcgccaaggcgctcgcgggcaaagccggtttcgagacg
gtctatgagcaaacctatccgcccacgaccgtggacttctcggcgatgatccgcgccatt
cgcgcggcctctcccgacatggtgttcgttgcttcctatcccgcagactcaacggcgatc
attcgcgctgtcaatgagatcggcgttggatcttccgtcaagctgtttggtggcgggatg
gtcggacttcaatatgcctcggtgatgcaggctctggggtcccagctgaacggggtcgtc
aactatcacacctatgtccccgaaaagaccatggcgtttcctggcgtgaaggaattcctg
gaccggtatgctgaaaaggccaaggcagccaaagtcgaaaccctcggctactatgtcgct
ccattctcctatgcgtcgggacagatcctggaacaggccgtcaaggcaaccggaagcctg
gataatgccgaactcgcaaaatatctgcgcaccaatgaggtccagacgatcgtcggccca
atccgttggggcactgacggagaatggtcgcagccccgggtcgtgatggtccagttccgc
gacgtcaaggacggcgatgccgagcaatttcgccaagagggcaagcaggtcatcgtctac
cccgacaaatataaaaccggggatctggtttcgcccttaagcggggcgcagggcaggtaa
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