Rhizobium johnstonii: pRL90019
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Entry
pRL90019 CDS
T00402
Symbol
fixK
Name
(GenBank) putative FNR/CRP transcriptional regulator FixK
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rle03000
]
pRL90019 (fixK)
Transcription factors [BR:
rle03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
pRL90019 (fixK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
HVO_A0261_N
MarR
HTH_20
HTH_24
MarR_2
HTH_11
TrmB
Motif
Other DBs
NCBI-ProteinID:
CAK03729
UniProt:
Q1M8X9
LinkDB
All DBs
Position
pRL9:19872..20633
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AA seq
253 aa
AA seq
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MCRPTMRNTTMLMQKNQVFEHAEMTNETIDAGQSLSALFLISATELVPAGRAICWEGDEA
KHLFQLVEGVIRLYRIVGDGRRVITAFQFAGDLIGASLQSDFLFTAEAVTDCKIRRVSRK
SFHDEVTRSNALHPSYISLLCHEMTAAHEQMVLLSKKNAEERLCSFIAKLVSRRNPQARQ
GVLRVPMSRQDIADHLGLTIETVSRTLTKLASRNVVIPEGRHDLRIVNLACLTQLSGDAD
DFLEESCHRVSLH
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgaccgacaatgaggaacacgacgatgctgatgcagaaaaaccaggtgttcgaa
catgccgaaatgacgaacgagacgatcgacgccggtcaatctctgtcagcgctcttcctc
atctcggcgacggaactcgtccccgccgggagagccatctgttgggagggcgacgaggcg
aaacatcttttccagctcgtagagggagttattcgcctctatcgcatcgtcggcgacggt
cgccgtgtgatcaccgcgtttcaattcgccggcgacctcatcggcgcgtcactgcaaagc
gattttcttttcacggcggaggcggttaccgattgcaagattcgccgcgtgtcgcggaag
agcttccacgatgaagtcacccggtcgaatgctcttcacccatcatacatctccctgctc
tgccacgagatgactgccgcgcacgaacagatggtgctgctctcgaagaagaacgccgag
gagcgcctgtgcagtttcattgcgaagcttgtatctcgccgcaatcctcaggcgcggcag
ggcgtattgcgcgtccccatgagcaggcaggacattgcggaccatctcggtttgaccatt
gaaaccgtgtcgcgcactctcacgaagcttgcatcgcgaaacgtcgtcattcccgagggc
aggcatgacttgcgaatcgtcaatctcgcctgcctcacgcagttgtccggcgacgctgat
gattttttggaggaatcctgtcatagggtcagcttgcactga
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