Rhizobium johnstonii: pRL90041
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Entry
pRL90041 CDS
T00402
Symbol
groL
Name
(GenBank) putative GroEL 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
pRL90041 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rle03019
]
pRL90041 (groL)
03110 Chaperones and folding catalysts [BR:
rle03110
]
pRL90041 (groL)
03029 Mitochondrial biogenesis [BR:
rle03029
]
pRL90041 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rle04147
]
pRL90041 (groL)
Enzymes [BR:
rle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
pRL90041 (groL)
Messenger RNA biogenesis [BR:
rle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
pRL90041 (groL)
Chaperones and folding catalysts [BR:
rle03110
]
Heat shock proteins
HSP60 / Chaperonin
pRL90041 (groL)
Mitochondrial biogenesis [BR:
rle03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
pRL90041 (groL)
Exosome [BR:
rle04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
pRL90041 (groL)
Exosomal proteins of other body fluids (saliva and urine)
pRL90041 (groL)
Exosomal proteins of breast cancer cells
pRL90041 (groL)
Exosomal proteins of colorectal cancer cells
pRL90041 (groL)
Exosomal proteins of bladder cancer cells
pRL90041 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CAK03750
UniProt:
Q1M8J9
LinkDB
All DBs
Position
pRL9:complement(40760..42379)
Genome browser
AA seq
539 aa
AA seq
DB search
MAHKQVLFHAEARGKVLQGATKLADAVRITLGPRSKSVLIEKKWGAPIVCNDGVTIAKEF
DLKDPEENLGARMLRAAAEKTGEVVGDGTSTSTVLAHAILADGHRNVVAGASAIDLKRGL
ERAVSRAVRALRDISRPVTTDREKQQVAAISAHNDETIGKLVAEAMAKVGKEGVITVEES
KTMETRLDVVEGMQFDRGYISPYFATDAEKMESILEDARILIFDRKISALGELVAPLEEI
AKSGRPLLVIAEDVEGEALATLIVNQIRGTFRNCAVKAPGFGDRRKEMLQDLAILTGAQL
ISEDLGFKLDKVTLEQLGTATRVVVDKETTTIIGGGGTQQAMKGRADQIRKQIEKTTSDY
DKEKLQERLAKLSGGVAVIRVGAPAEAEMKAKKDALDDAINATKAAVEEGIVPGGGLALL
RCMKAVAEEEELCDGDERTGVQILKRSLEVPARQIAENSAVDGGVVVARMLEGEGSIGFD
AARNRYVDLLEEGIIDPTKVVRVALENAVSVASILLLTEATMTELPEPIQQQVSPTMEM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaaacaggttcttttccatgctgaggcgagaggcaaggttctccaaggcgcg
accaagcttgccgacgctgtccgcatcacgctggggccacgttccaaatcggtcttgata
gagaaaaaatggggcgcgcccatcgtctgcaacgacggcgtgacgatcgcgaaggagttc
gatctgaaggatcccgaggaaaacctcggggcccgaatgttgcgtgccgccgcggaaaaa
accggcgaagtggtcggagatggaacgagcacgtcgaccgtgctcgctcacgcaatcctc
gctgacggccatcgcaacgtggtggccggtgccagcgccatcgatctcaaacgaggcctt
gagcgcgcggtcagcagggcagtcagggcactgcgagatatatcgagacctgtaacgaca
gacagggagaagcagcaggttgccgccatctccgcccacaacgacgaaaccatcggcaag
ctcgttgccgaagcgatggcaaaagtcggtaaggagggcgtgatcaccgtcgaggaatcc
aagacgatggagacccgtctcgacgtggtcgagggcatgcagttcgaccgcggctatatc
tcgccctattttgccacggatgcggagaagatggagagcatcctggaggatgcccggatc
ctgatcttcgaccggaagatatcagcgcttggcgagttggtcgccccgctcgaggaaatt
gccaaatcgggcaggccgcttctcgtcatcgccgaagacgtcgagggcgaagcccttgcc
actctgatcgtcaaccagatccgcggaacctttcgcaactgtgccgtcaaggctccgggc
ttcggtgatcggcgcaaggaaatgctgcaagatctggcaatcctgaccggcgctcagctc
atttccgaagatctcggcttcaaactcgacaaggtgaccctggaacaacttggcacggcg
acgcgcgttgtcgtggacaaggaaacgacgacgatcatcggcggcggtggcacacagcag
gcgatgaaaggacgcgctgaccagatccgcaaacagatcgaaaagacaaccagcgactac
gacaaggagaaactgcaggaacgacttgcaaagctctccggcggcgtcgccgtcattcgc
gtcggcgcccccgccgaagcggagatgaaggccaaaaaggatgcccttgacgatgcgatc
aacgccacgaaggccgccgtcgaggagggtatcgttccgggtggagggctcgcactcctg
cgctgtatgaaggctgtggccgaggaagaggaactctgcgatggggacgagcggacgggc
gtgcaaatcctgaaacggtcactcgaagttccggcgcggcagatcgccgaaaactcggct
gtggatggcggggtcgttgtcgccaggatgcttgaaggggaaggatccatcggcttcgac
gctgcccgcaaccgatatgtcgatctcctggaggaaggtatcatcgatccaaccaaggtc
gtacgcgtcgcgttggagaatgctgtctccgtcgccagcatattgctgttgacggaggca
acgatgacggaactcccggaaccgatccaacaacaggtgtcgccgacgatggagatgtaa
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