Rhizobium johnstonii: pRL90052
Help
Entry
pRL90052 CDS
T00402
Symbol
lpsB2
Name
(GenBank) putative polysaccharide biosynthesis O-antigen related protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00541
Biosynthesis of various nucleotide sugars
rle00552
Teichoic acid biosynthesis
rle01100
Metabolic pathways
rle01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
pRL90052 (lpsB2)
00552 Teichoic acid biosynthesis
pRL90052 (lpsB2)
Enzymes [BR:
rle01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
pRL90052 (lpsB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
CoA_binding_3
adh_short
KR
ThiF
adh_short_C2
PglD_N
CoA_binding
NAD_binding_4
Rho_N
Motif
Other DBs
NCBI-ProteinID:
CAK03763
UniProt:
Q1M8M1
LinkDB
All DBs
Position
pRL9:53932..55899
Genome browser
AA seq
655 aa
AA seq
DB search
MPMQALVAPLLAMPRVAKRALALLLDSSFCVLTIWLAYCFRLNEWTVLTGVQWLPVFVSL
CMALPIFIVMGMYRAIFRYANMAAFITVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQP
FLLLIAIGLSRLSIRYWLGDAYQRILHKNMLAKVLIYGAGTAGRQLAGALINSAELNVVG
YLDDDPRLKGGVMGGLPIYDPSDLPVLAESLGVHNVLLALPSASRQRRNEILEHIRKARV
NVRTLPDLTALAQGRIAVSDIRELEIEDLLGREAVAPRQELLDKSMRNKVVMVTGAGGSI
GGELCRQILRTGPSSLILIDQNEFALYNIHAELQKLAELYKHENMQIVPILCSVRDQDRM
EHVMQSWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLVAARAANKCGVSNFVLISTD
KAVRPTNVMGASKRLAEMVLQALAAESATDRMRTNFSMVRFGNVLGSSGSVVPLFRQQIK
EGGPVTLTHPDITRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLARKMVELS
GLAVRDEDNPEGDIELSVTGLRPGEKLFEELLIGDNPETTEHPRIMKAREDFLSWAELSR
RLNALNAALDRNDMIAARATLAELVSGYSSTGEVSDLAFTGAEPIRLPQTIQSKL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgcaagcgctcgtcgcccctctgctggcgatgccgcgggttgccaaacgcgct
ctggccttgctgctggattccagcttttgtgttctgacgatctggctggcctattgtttc
cgcctaaacgaatggacggtgctgacaggtgtgcagtggctgccggtcttcgtttcgctc
tgtatggcacttcccatcttcatcgtcatgggcatgtatcgggcgatcttccgctatgcc
aatatggctgctttcattactgttctgaaggcgattgcgatctacggcgtcgccttcatg
acgatatttacagcactcagcgtccccggtgttccgagaaccgtcggcatcctccagccc
ttccttctgttgattgcgatcggcctgtcgaggttgagtatccgctactggctcggggat
gcctaccagcgcatccttcacaagaatatgctcgccaaggtgttgatctatggggcaggg
acggccgggcggcaactggccggtgccttgatcaacagtgccgaactcaatgtcgtcggc
tatctggatgatgatccgcgtctcaagggcggcgtcatgggtggtttgccgatctacgac
ccctcggatcttccggtgcttgccgaatctctcggcgtgcacaacgtgcttcttgcactt
ccctccgcatcgcggcagcgtcgcaacgaaatcctggagcacatccgtaaagccagggtc
aatgttcgcacgttgccggatctcactgccctggctcagggacgcatcgccgtctccgac
atccgagagctggagatcgaagatcttctgggaagagaagcggtcgcgccgcgccaggag
ctactcgacaagtcgatgcgcaacaaggtggtgatggtcaccggtgctggcggctcgatc
ggcggcgagctatgtcgtcagattttgcgcaccgggccttccagcctgatcctcatcgat
cagaacgagtttgcgctttacaatatccatgccgaattgcagaagctcgccgaactgtac
aagcatgaaaatatgcagatcgttccgattctgtgttctgtccgcgatcaggatcgcatg
gaacatgtcatgcagagctggcgacctcagacgctctatcatgcagccgcttacaagcat
gttccccttgtcgaacacaatgccgtggaaggcatcaagaacaacgtgatgggtacgttg
gtcgcggcacgcgcggcgaataaatgcggcgtctcgaatttcgtgctgatcagcacagac
aaagccgtgcgtccgacaaatgtgatgggcgccagcaagaggctggcggagatggttctg
caggcgcttgcggcggaatcggcgaccgacagaatgcgaacgaatttctccatggtccgt
ttcggaaacgtcctcggctcctccggatctgtcgtgccgcttttccggcagcagatcaag
gagggcggcccggtgacactgacacatcctgatataacccgctacttcatgaccatttcg
gaggcttctcaactcgtcatacaggccggcgcgatggcggagggcggagatgtcttcctg
ctcgacatgggagagccggttcgcatcgcagatctcgcccgcaagatggtggagctttcc
gggctggccgtccgggacgaagacaatcccgaaggcgatatcgagctgtccgttaccggt
cttcgacccggcgagaagctctttgaagagctgttgatcggggataatcctgaaacaacc
gaacatcctcggattatgaaggcgcgcgaggatttcctgtcctgggcggagctgtcgcga
aggctcaacgcgctcaacgcggcgttggaccggaacgatatgatcgctgcacgtgcgaca
ttggcggagctcgtttccggctattcgtcaacgggtgaggtctcggatctggctttcacc
ggcgccgagccaatacggctacctcagacaattcaaagcaagctgtag
DBGET
integrated database retrieval system
