Rhizobium johnstonii: pRL90073
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Entry
pRL90073 CDS
T00402
Name
(GenBank) putative deoR family transcriptional regulator
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rle03000
]
pRL90073
Transcription factors [BR:
rle03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
pRL90073
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_PafC
Put_DNA-bind_N
HTH_Crp_2
PqqD
MarR
HTH_10
MarR_2
AcetylCoA_hydro
DDRGK
Motif
Other DBs
NCBI-ProteinID:
CAK03784
RhizoBase:
pRL90073
UniProt:
Q1M8P3
LinkDB
All DBs
Position
pRL9:73303..74076
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AA seq
257 aa
AA seq
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MFLTDRQTEIVAIAKSSGRVLVEELASRFSVTPQTIRKDLNDLCDAQVLTRIHGGATFPS
GTENVKYEARRQIAASEKQAIGIAAVELIPSGASLFINIGTTTEAVGEALADHHELMVIT
NNINVANRLRLFPAIEVVIAGGVVRGSDGGIVGEAAVDFIRQFKVDYAVIGASAIDTDGA
LLDYDFREVKVAQAIIANARHVILVADSTKFERTAPVRIGQLTQVHTFITDHCPVPSIRN
LCLENNVKLIETNGRSR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgaccgaccggcaaactgaaatcgtggcgattgcgaaatcgagcggcagggtg
ctggtcgaggagctcgcctcccgcttttcggtgacgccgcagacgatccgcaaggacctg
aacgatctctgcgatgcgcaggtgctgacgcgcatccatggcggcgccacattcccgagc
gggacggagaacgtcaaatacgaagcgcgccgccagatcgccgcttccgagaaacaggcg
atcggcattgccgcggtcgagctgatcccgagcggtgcctcgcttttcatcaatatcgga
acgacgaccgaggcggtgggcgaggcgcttgccgaccatcacgagctgatggtgatcacc
aacaatatcaacgttgccaataggttgcgacttttcccggcaatcgaggtggtcattgcc
ggcggggtcgtgcgtggttcggacggcgggatcgtcggcgaggcggccgtcgatttcatc
cgccagttcaaggtcgattacgccgtgatcggcgcgtcggcgatcgataccgacggcgcg
cttctcgactatgattttcgcgaagtgaaggtcgcccaggccatcatcgccaatgccaga
catgtcattctcgttgccgattcgacgaaattcgaacgcaccgcaccggtcaggatcggc
cagcttacccaagttcataccttcatcaccgatcattgtccggtgccgtcgatccgcaat
ctctgcctcgaaaacaatgtgaaattaatcgaaaccaacggcagatctcgctag
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