Rhizobium johnstonii: pRL90127
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Entry
pRL90127 CDS
T00402
Name
(GenBank) putative glycosyl hydrolase
Organism
rle
Rhizobium johnstonii
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Glyco_hydro_2
Motif
Other DBs
NCBI-ProteinID:
CAK03844
RhizoBase:
pRL90127
UniProt:
Q1M8U5
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Position
pRL9:128004..130772
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AA seq
922 aa
AA seq
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MNAYSQSLAPANTPLRETFSLDGTWEFRHETDRAWRHAKVPAHWQACFEDLAVSFGSATY
RRTFTLPAEWSAREIAIRFGAVSDLATVSINGTEIGRHEGGYLPFEFVIPPALLKAENTV
EVLACLPDAYRDESGADFAEIPHGKQSWYGPQGGIWQSVLIEARDPAHISSLRLDPIWPE
ARLDLKARFASMVAGSLKIEIIGPQGMPVFTGNIPAAGNTLDHSIQLDSVAPWSPDSPNL
YTITTILSADGVEIDSRQESFGFRRFEAKDGFLHLNGKPLYLRAALDQDYYPDGFGAPPS
LDLLEDQLRKAKAMGLNCLRCHIKVPDPRYYEVADRLGMLIWSEIPNIETFTPASAERLR
TTMEGILARDGNHPSIVIWTLINEDWGTRLREAAEQRQWISDMVDWLRVEDPLRLVVDNS
ACFPNVHVKTDINDYHFYRTAVDRREEWDTLCREFAGNADWTFSTEKEAVRTRKEPLVLS
EFGVWGLPDPARLREKNGRDPWWMAYGATWADGTALPQGIEARFRELALEKVFGDLGRFI
EKVQWYQYMNLKYEIEVIRTHAPIGGYVITELTDVHWEGNGLMDMARNPRVFAKALPAVN
SDIVIAPGAARHAVYEGQTASFDIKVSSGGTALPEGSRLVWEFGAEKGEIPLPAMAPMQV
HNAPITTTADAVPVPAIQKARFQVVSPDGSVLSQNFETLAVYGKRDALPPIRFASNDDGI
SERLSALGHVSVSPHEADVFITKDIDADRVEAIHSGQRVLQIVDKDPGRLRDDAPPRDGP
MSIEIDPGAGGMVSGPYFSFPGYNLVNRHKSIWRGDWVGNFSWLRRDGVFAHVPGGPLFD
LSFTGVAPHQVMTGLRPWEFQGRVYAGVVIGWVHKPAAFIIEKRLGRGKLVATTFRLHQE
APDVDPLATALYDGLFALATRP
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctattcccagtcgctcgccccagcgaacacaccgctccgcgaaacgttttcc
cttgatgggacctgggagttccgccacgagaccgatcgtgcatggcgacatgcaaaggtg
ccggcgcactggcaggcgtgtttcgaggatctcgccgtcagcttcggatcggcaacctat
cgcagaaccttcacgctccccgcagaatggtcggctcgggaaatcgccatccgcttcggt
gctgtcagcgatctggccactgtctccatcaacggcactgagatcggccgtcatgaaggc
ggttatcttcctttcgaattcgtgattccacccgctctgttaaaggcggagaacaccgtc
gaagtcctggcctgcctgccggatgcttaccgcgacgagagtggcgccgattttgcggag
atcccgcatggcaagcagagctggtatggcccgcaaggcggcatctggcagtccgtcctc
atcgaagcccgcgatcccgctcacatctcatcgcttcgcctcgacccgatttggccggaa
gccaggctcgatcttaaagcccgctttgcgagcatggttgcaggctcgctgaaaatcgag
atcatcggcccgcagggcatgccagtctttaccggaaacattccggccgcgggaaatacc
ctcgatcattcgatccagctcgactccgtcgcgccatggtcgccggacagcccgaacctc
tatacgatcacaacgatcctcagcgctgacggcgtcgagatcgacagccggcaggaaagt
ttcggctttcgccgcttcgaagccaaggacggcttcctgcatctgaacggcaagccgctt
tatctgcgcgccgcgctcgatcaggattactatcccgatggtttcggcgcgccgccttcg
ctcgacctgctcgaagaccagttgcgcaaggctaaggcaatgggcctgaattgcctgcgc
tgccacatcaaagtgccggacccgcgctattacgaggtcgccgaccggctgggcatgctg
atctggagcgaaattccaaatatcgagaccttcaccccggcctccgccgagcgcctgcgc
acgacaatggaaggtattctcgcccgtgacggcaatcacccctccatcgtaatctggacc
ctgatcaatgaagattggggcactcggctgcgcgaagcggccgaacagcggcaatggatt
tccgacatggtcgactggctgcgtgtcgaagacccgctacggctcgttgtcgacaattcc
gcctgcttcccgaacgtccacgtcaagaccgacatcaacgactaccacttctaccgaacg
gcggtggatcggcgcgaggaatgggacacgctctgccgcgaattcgccggcaatgccgac
tggaccttctcaaccgaaaaggaagccgtgcgcacgaggaaggaaccgcttgtcctctcc
gagttcggcgtctggggtctaccggatcctgcccgtctgcgcgaaaagaacggccgcgac
ccctggtggatggcgtatggtgccacctgggcggatggcacagcactgccgcagggcatc
gaagctcgtttccgcgaactcgcccttgagaaagtttttggtgatctcggtcgtttcatc
gagaaggtgcagtggtatcaatacatgaacctgaaatacgagatcgaggttatccgaacg
cacgcgccgatcggaggttatgtcatcaccgaacttaccgatgtccattgggaaggcaac
gggctgatggacatggcacgcaatccgcgcgtcttcgccaaagcgctgccggccgtcaat
tccgacatcgtcatcgcgccgggtgctgcccgccacgccgtctatgaggggcagacggcc
agcttcgacatcaaggtgtcgagcggcggaacagcactgcccgaaggcagtcgcctcgtc
tgggaatttggcgctgaaaaaggcgagataccgctgccggccatggcgccgatgcaggtt
cacaatgccccgatcaccacaacagcagatgcggtgccggtgcccgcgatccaaaaggcc
cggttccaggtcgtgtcgcccgatggaagcgtgctgtcccagaatttcgagacactcgcg
gtctacggcaaacgggatgcgctaccccccatccgctttgcttcgaacgacgacgggatt
tccgagaggttgtcggcccttggccatgtcagcgtctcgccgcacgaggcggatgtcttc
atcaccaaggacatcgatgccgatcgcgtcgaggcaatccattccggccagcgggtgctg
cagatcgtcgacaaggatcccggccgtctgcgcgatgacgcgccgccgcgcgatggccct
atgtcgattgaaatcgatccgggcgccggcggcatggtttccgggccatacttcagtttt
cccggctacaatctcgtcaatcgtcacaaatcgatctggcgcggggattgggtcggcaac
ttctcctggttgcgccgggatggcgtcttcgcccatgtgccgggcggtccgctgttcgac
ctgtccttcacgggcgtcgcgccgcaccaggtgatgactggcctccgtccctgggaattc
caaggtcgcgtgtacgccggcgtcgttatcggttgggttcacaaacccgctgccttcatc
atcgaaaagcggctcggccgcggtaagcttgtcgcgacgaccttccgcctccaccaggag
gcaccggatgtcgacccgcttgccaccgcgctttacgatggcctctttgctcttgccacg
agaccgtga
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