Rhizobium johnstonii: pRL90159
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Entry
pRL90159 CDS
T00402
Name
(GenBank) conserved hypothetical protein
Organism
rle
Rhizobium johnstonii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4082
DMFA2_C
He_PIG
Cadherin_4
Big_9
Big_7
Mo-co_dimer
BatD
Motif
Other DBs
NCBI-ProteinID:
CAK03874
RhizoBase:
pRL90159
UniProt:
Q1M900
LinkDB
All DBs
Position
pRL9:166305..171491
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AA seq
1728 aa
AA seq
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MYRNARRWTSRSLLLDSLVPRWLTVGGKGRPRKPADKREDSAQLATSVQTADGNKHDGTL
VDNPYNNAALNEHDVGPSGGVIGDADGGVDINHPAPSLPALPNAFAANRETGVRSGDNAA
SRLFAHTPGFAGFERDAHGIAFGAQSSLYRTYAGMSLIGDDPLAPYLSQSPAPIVSGQGS
AAVAGERAHSGNVVILESSPSAQATSHQTGADSLAFGMPFGVCGCGYFTSPTRILDWAHG
GAMLQQDGQLPGTRLTEGPDFVSTIKRAIGASISDPLLDRDLSPLSGWRGTATWTDSTIL
NGSLPGGGEIGTGTASSKGIGVLSGSVTTPPSTQRSLTTQNLAAAAAANNLIVLENQKQG
NPESEWGIDGAGSSNIEGFATDISVDNGKTISFKINTNSTNYRIDIYRLGYYGGMGARKV
DTIQHTGLQNQPNPLRNAATGTVDAGNWAVSASWTAPEDAVSGVYIAKLVRQDGTSGQNH
IPFIVRDDDSQSDIVFQTADQTWQAYNGWGGANFYGGNGPATGQGAGRAYAVSYNRPIAT
RGGVGTVAGPQDYLFGAEYAGIYWLEQNGYDVSYMAGVDADRYGSLLLNHKMYLDVGHDE
YWSGQQRANVEAARDAGVNLQFWSGNEVYWRTRWGNAYSADGTPYRTLISYKETWSPAAS
IDPSNEWTGTFRDPRLSPPAVGGGSPENSLTGQLFQVDDVGSNLQAITIPYDDANLRFWR
NTSVANLQPGQTATLTKNYLGYEWDEAVDNGFDPAGLVKLSSTTVPVSSYLLDYGNTTGN
GVSTHNLTLYRAPSGALVFGAGTVYWAWGLSDNHDLTATPTDPRVQQAMVNLLADMGIQP
GTLQSGLVAATASSDQVAPTSVITVPATVAVGSSVTITGTATDAGGGVIAAVEVSTDNGA
SWHPATGDENWTYTWSPQIAGTYTIRSRAVDDNINLETPSAGRTVTVSGPSYTSLFGAAT
PAVVNTNDASAVELGVRFQTSAAGTVTGIRFYKGSQDTGTHTGSLWSSTGTQLATLTFTN
ETASGWQTAYFSSPVALTVGQTYTASYHTNAGRYSTTANYFVSNVTSGPLTAPASGNGVY
RYGSNSLYPTATFDQTNYWVDVMFNPSASNTTPTAVADAGDATEKGGVANGSGGVVASGN
VLTNDTDADAGDTKTVTAIRFGATAGTLGTALNGTYGSLVLSASGVYSYAVNETSAAVQA
LRQSTNTLSDVFSYTMRDTGGATATANLTVTIHGANDAPVLAVQTAAQNATVGTAFSFVL
PTTTFTDVDSGETLTYAATSADGTALPAWLSFNASTRTFSGTATTSGTYGVRVTTTDLGG
LTANETFNIAVSTPGNTTPTAVADAGDATEKGGVANGSGGVVASGNVLTNDTDADAGDTK
TVTAIRFGVTAGTLGSALNGTYGSLVLSASGVYSYAVNETSAAVQALRQSTNTLSDVFSY
TMRDTGGATATANLTVTIHGANDAPVLAVQTAAQNATVGTAFSFVLPTTTFTDVDSGETL
TYAATAADGTALPAWLAFNATTRTFSGTPTTSGTYGVRVTATDLGGLAANETFNITATVA
PATYSLFNASSTPAQTNLNDGQQLEVGVKFQSNVVGDVTAIKFYRSANDNGQNVVDLWTT
TGTELATATFTNTTASGWQTVNFTTPVTIAANTTYIASYHTTGAYVATDGFFTNGVSNGP
LSALSSAAAGGNGVYAYGGSATTGLFPTSTFDSANYYADVVFRPQLAA
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgaaacgctcgccggtggacatcacgctcactcctgctggattcgttagttccc
cggtggttgaccgtcggcggaaagggaaggcctcgcaagcctgccgataagcgcgaggat
agtgctcaacttgctacatccgtgcaaacggcggatggaaacaagcatgatggtacgctt
gtcgacaacccctacaacaacgcggcgctcaatgagcatgatgttggaccgagtgggggc
gtgatcggcgacgcggacggtggggtggatatcaaccacccagcgccgtccttgcctgcc
ctgcctaacgcattcgcagcaaatcgcgagacaggggttcgaagcggggacaatgccgcg
tctcggttattcgcccacacgcctggttttgcaggtttcgagcgggacgcgcacggaatt
gcattcggggctcaatcgtccctttatcgcacctacgctggaatgagcctcataggcgac
gatcctttggctccgtatctgtcgcaaagccctgcaccgatagtttcgggacaaggttct
gccgcggtggcgggcgagcgtgctcactcgggcaacgtcgtcatcctcgaatcgagcccg
tcagcgcaggcaacttcgcaccagaccggcgcggattcactggcgtttggcatgcccttt
ggtgtgtgcggatgcggctactttacttcccccacgcggattctcgattgggcccatggc
ggcgccatgcttcaacaggacggccaattgccgggaaccaggctgaccgaggggccggac
tttgtatcgacgatcaagcgggccatcggcgcctcgatcagcgacccgcttctcgatcgt
gacttgtcgcctctctcgggctggcgcggaaccgcgacgtggacggattcgacgatcttg
aacggatcattgccaggcggcggagagatcggaacgggcaccgccagttccaagggcatt
ggcgtcctttccggctcggtgacgacgccaccttctacgcagcggtcgttgacgacgcaa
aatctggcggccgcggctgcggccaacaacctgatcgtgctggaaaaccagaagcagggt
aacccggagagcgagtggggcatcgacggcgccggtagctccaacatcgagggatttgcg
accgacatcagcgtcgacaatggcaagacgatcagcttcaagatcaatacgaattccacc
aattatcggatcgacatataccggctcggctattatggcggtatgggcgcccgcaaggtc
gacaccattcagcacaccggattgcagaatcaacctaatccgttgcgcaatgccgcgacc
ggcacggtcgatgccggcaactgggcagtgtcggcttcgtggaccgcacccgaggacgcc
gtctcaggcgtctatatcgccaagctcgtgcgtcaagatggcacctccggccaaaatcac
atcccgttcatcgtgcgcgacgacgacagccaaagcgacatcgtcttccagacggcagac
cagacctggcaagcttataacggttggggtggcgcaaacttttacggcggcaatggtccg
gcgacggggcagggcgctggtcgcgcatatgcggtcagctacaatagaccgattgcgacc
cgcggaggcgtgggaaccgttgccggcccgcaggactatctgttcggcgccgaatatgca
ggaatctactggctggaacagaacggttatgacgtttcctacatggcgggggtcgacgcc
gatcgctatggcagcctgcttctgaatcacaagatgtatcttgatgtcggccatgacgaa
tactggtcgggccagcaacgcgccaatgtcgaggcggctcgcgacgccggtgtcaacctt
cagttctggagcggcaacgaagtctactggcgcacccggtggggcaatgcctatagcgcc
gacggcacgccctatcgcacgcttatctcttataaggaaacgtggtcgcccgccgccagc
atcgatccctccaatgaatggacggggacatttagagatccgcgcctgagcccacctgcg
gtcggcggcggcagccccgagaactcgctcaccgggcagttgttccaggtcgacgacgtc
ggcagcaatctccaggcgatcactattccctatgacgacgccaatctgcgtttctggcgc
aatacgagcgtcgccaaccttcagcccggccagacggcgacgctcaccaagaactatctc
ggttacgaatgggacgaagcggttgacaacggcttcgatccggccggcctggtcaagctg
tcttcgacgacggttccggtaagcagctatctgctcgactatggcaatacgacgggcaac
ggcgtctcgacccacaatctgacgctttatcgcgctccgagtggggcgctggtgttcggc
gccggcaccgtctactgggcctggggcctgagcgacaatcacgacctcacggcgacgccg
acggacccgcgcgtgcagcaggcaatggtcaacttgcttgccgatatgggcattcagccc
gggacgctgcaatccgggctcgtcgccgcgaccgcttcgtcggaccaggttgctccgacc
tccgtcatcaccgtgcccgcgacggtggccgttggatccagcgtgacgattacgggcacc
gctaccgatgcgggcggcggtgtcatcgccgccgtcgaggtttcgaccgacaacggcgcg
agttggcatccggcgaccggcgatgagaactggacttatacctggtcgccgcagatcgcc
ggcacctacacgatccggtcccgcgccgttgacgataacatcaacctcgaaacgccctcg
gccggacgcacggtcaccgtcagcgggccgagttacacgtctctcttcggcgcggcgacc
cccgccgtcgtcaacacaaatgatgcgtccgccgtcgagctcggagtccgcttccagacc
tctgcggcagggacagtcaccggcatccgcttttacaaaggcagccaggatacgggtacc
cataccggttcgctgtggtcgagcactggtacccagctcgcgaccctcaccttcacgaac
gaaaccgccagcggctggcagaccgcgtatttctccagtcctgtggcattgacggtcggg
cagacctacacggcgtcgtaccatacgaatgccggtcgttactcgaccaccgccaactac
tttgtctccaatgtgacgagtgggccgctgacggcaccagccagcggtaatggcgtatac
agatacggcagcaacagcctgtaccctacggccaccttcgatcagacgaattactgggtc
gatgtgatgttcaatccatcggcctcgaacacgacgccgacggcggttgccgatgcaggg
gatgcgaccgagaagggtggcgtggccaacggttcgggcggcgtagttgccagcggcaac
gtgctgaccaacgacaccgatgcggatgccggtgataccaagacggtgacggcgatccgt
ttcggcgcaacggccggcacgctcggcacggccttgaatggtacctatggcagtctcgtg
ctcagcgcatcgggcgtctatagctatgccgtcaacgagaccagtgccgccgtgcaggcg
ctgcggcagtcgaccaacacactgagcgatgtgttcagctacaccatgcgcgacactggc
ggagccaccgccacggcaaacctgaccgtcaccatccatggcgccaatgacgcgccggtg
cttgcggtccagacggctgcccagaacgccaccgtcggcacagccttctcctttgtgctg
ccgacgacgaccttcaccgatgtcgatagcggcgagacgctcacctatgcggcaacgtct
gccgacggcacggcgctgcctgcctggctgagcttcaatgcctcgacccggaccttctcc
ggaacggcgacgacatcaggcacctatggcgtcagggtcacgacgaccgaccttggcggc
ctcaccgccaacgagaccttcaacatcgccgtgtcgacgcctggcaacacgacgccgacg
gcggttgccgatgcaggggatgcgaccgagaagggcggggtcgccaacggttcgggcggc
gtggttgccagcggcaacgtgctgaccaacgacaccgatgcggatgccggtgataccaag
acggtgacggcgatccgtttcggcgtaacggccggcacgctcggttcggcactgaacggc
acctatggcagtctcgtgctcagcgcatcgggcgtctatagctatgccgtcaacgagacc
agtgccgccgtgcaggcgctgcggcagtcgaccaacacactgagcgatgtgttcagctac
accatgcgcgacactggcggagccaccgccacggcaaacctgaccgtcaccatccatggc
gccaatgacgcgccggtgcttgcggtccagacggctgcccagaacgccaccgtcggcaca
gccttctcctttgtgctgccgacgacgaccttcaccgatgtcgatagcggcgagacgctc
acctatgcggcaaccgctgccgacggcacggcgctgcctgcctggctggccttcaacgcc
acgacgcggacgttcagcggcacaccgacgacatcaggcacctacggcgtcagggtgacg
gcaaccgatctcggcggccttgccgccaatgagacattcaacatcactgcgacagtggcg
cctgcgacctacagcctgtttaacgcttccagcacgccagcccagaccaacctcaacgac
ggtcagcagctcgaggtcggcgtcaagttccagtcgaacgttgtcggtgatgtcaccgcc
atcaagttctaccgcagcgccaacgacaacggacagaacgtcgtcgatctgtggaccacc
accggcaccgagcttgccaccgccactttcaccaacaccacggcaagcggctggcagacg
gtgaactttacaacgcccgtcacgatcgccgccaacaccacctatatcgcctcctaccac
accaccggcgcatacgtggcgacggatggcttcttcaccaacggcgtcagcaacggtccg
ctgtcggcgctatccagcgctgccgctggcggcaatggcgtctatgcctacggcggatct
gccaccacaggtctcttcccgaccagcacctttgactcggcaaactattatgccgatgtg
gtcttccgaccgcagctcgcagcttga
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