Rhizobium johnstonii: pRL90208
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Entry
pRL90208 CDS
T00402
Symbol
codA
Name
(GenBank) putative cytosine deaminase
KO
K01485
cytosine/creatinine deaminase [EC:
3.5.4.1
3.5.4.21
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00240
Pyrimidine metabolism
rle00330
Arginine and proline metabolism
rle01100
Metabolic pathways
rle01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
pRL90208 (codA)
09105 Amino acid metabolism
00330 Arginine and proline metabolism
pRL90208 (codA)
Enzymes [BR:
rle01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.1 cytosine deaminase
pRL90208 (codA)
3.5.4.21 creatinine deaminase
pRL90208 (codA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidohydro_3
Amidohydro_1
ESR1_C
BenE
Motif
Other DBs
NCBI-ProteinID:
CAK03926
UniProt:
Q1M947
LinkDB
All DBs
Position
pRL9:227413..228702
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AA seq
429 aa
AA seq
DB search
MFDLIVRNANLPDGRKGIDIGIQGGKIIAVEHNLQAQAGEEIDATDRLVSPPFVDPHFHM
DATLSLGLPRMNVSGTLLEGIALWGELRPIVTKEELVDRALRYCDLAVTQGLLFIRSHVD
TSDPRLVTVEAMIEVREKVAPYIDLQLVAFPQDGYYRSPGAIDALNRALDMGVDIVGGIP
HFERTMGEGTASVEALCRIAADRGLPVDIHCDETDDPLSRHIETLAAETIRFGLQGRVAG
SHLTSMHSMDNYYVSKLIPLMAEAEINVIPNPLINIMLQGRHDTYPKRRGMTRVRELMDA
GLNVSFGHDCVMDPWYSMGSGDMLEVGHMAIHVAQMAGIDDKKKIFEALTVNSAKTMGIA
GYGLEKGRSADLVILQASDTLEALRLKPNRLAVIRRGKVIARSAPRIGELFLDGRPARID
GGLDYVPRY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatctgatcgtcagaaatgcaaatctccccgatggccgaaaggggatcgatatc
ggcatccagggcggcaagatcatcgctgtcgagcacaatctccaggcgcaggcgggggaa
gaaatcgacgcgaccgaccggctggtcagcccgcccttcgtcgatccgcatttccacatg
gacgccaccctgtcgctcggcctgccgcgcatgaacgtatccggcacgctgctcgagggc
atcgcgctctggggagagttacgcccgatcgtgacgaaggaagaactggtcgatcgtgcg
ctgcgctattgtgatctggcggtgacgcagggcctgctcttcatccgcagccatgtcgat
accagtgaccccagactggtgaccgtcgaggcgatgatcgaggtgcgcgagaaggtcgcg
ccctatatcgatctccaactggtcgccttcccgcaggacggttattaccgctcgccgggc
gcgatcgacgcgctcaaccgagccctcgacatgggcgtcgatatcgtcggcggcattccg
catttcgaacggacgatgggcgaagggaccgcttcggtcgaagcgctctgccgcatcgcc
gccgatcgcggcctgccggtcgacatccattgcgacgaaaccgacgatccgctgtcgcgc
catatcgaaacgctggctgcggaaaccatccgcttcggcctgcagggacgcgtcgccggc
tcgcatctgacctcgatgcactcgatggacaattattacgtctccaagctcattccgctg
atggcggaggccgagatcaacgtcatccccaatccgctgatcaacatcatgctgcagggc
cggcacgacacctatccgaaacgccgcggcatgactcgcgtgcgcgaattgatggatgcg
gggctcaatgtttccttcgggcacgattgcgtcatggatccctggtattcgatggggtcg
ggcgacatgctggaggtcggccatatggcgatccatgtcgcgcagatggccggcatcgac
gacaagaagaagatctttgaggcgctgaccgtcaattcggcgaagacgatggggattgca
ggttacggcctggaaaagggacgcagcgccgacctcgtcatcctccaggccagcgacacg
ctggaggcgctgcggctgaagccgaaccggctggcggtaatccgccgcggcaaggtcatc
gcccgctcagcgccgcgcatcggcgagcttttcctcgacggacgcccggcacggatcgac
ggcggcctggattatgtgcctcggtattga
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