Rhizobium johnstonii: pRL90225
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Entry
pRL90225 CDS
T00402
Name
(GenBank) putative binding periplasmic protein of ABC transporter
KO
K10439
ribose transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
rle02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
pRL90225
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
pRL90225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL90225
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
pRL90225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Pam3_gp32
EssA
Motif
Other DBs
NCBI-ProteinID:
CAK03946
UniProt:
Q1M959
LinkDB
All DBs
Position
pRL9:complement(243351..244304)
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AA seq
317 aa
AA seq
DB search
MTLNLTRRTMIAAAGFTALTFIGLTGAQAQEKKTVALVQINQQALFFNQMNEGAQKAADA
AGVKLVIFNANNETTAQNSAIETYVQEKVSGLAVVAIDVNGIMPAVKQAADAGIPVVAID
AILPDGPQKAQIGVDNAAAGADMGKYFLDYVKANMGGKAKLGVVGALNSFIQNIRQDGFE
KTLKGVDGIEMAGVVDGQNIQDNALAAAENLITANPDLTAIYATGEPALMGAIAAVQSQG
KQDKIKVFGWDLTAEAIAGIDAGFVVAVVQQDPAAMGGAAVDALVKASAGEAVTKTISVP
ITIVTKENVEPYRAVFK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacactgaatttgacaagacgaacgatgatcgcagccgccggatttacggcattgacc
ttcatcggcctcaccggcgctcaggcgcaggaaaagaagaccgtcgcactagtgcagatc
aaccagcaggcgcttttcttcaaccagatgaatgagggcgcccagaaggcggccgatgcc
gccggcgtcaagctggtgatcttcaacgccaacaacgagacgacggcgcagaacagcgcg
atcgaaacctatgtccaggaaaaggtctccggccttgctgtcgtggcgatcgacgtcaac
ggcatcatgccggcggtcaagcaggcggccgatgccggcattcctgtcgtcgccatcgac
gccatcctgcccgatggtccgcagaaggcgcagatcggcgtggacaatgccgcggccggc
gccgacatgggcaaatacttcctcgactacgtcaaggcgaacatgggcggcaaagccaag
ctcggcgtcgtcggcgcgctgaactcgttcatccagaacatccgccaggacggcttcgag
aagaccctgaaaggcgtcgacggcattgaaatggccggcgtcgtcgacggccagaatatc
caggacaacgcccttgcggcggctgaaaacctgatcaccgccaatcctgacctgacagcg
atctacgccactggcgagccggccctgatgggggcgatcgccgccgtccagagccagggc
aagcaggacaaaatcaaggtgttcggctgggatctgactgctgaagccattgccggtatc
gatgccggcttcgtcgtcgccgtcgtccagcaggatccggccgcaatgggcggtgccgcc
gtcgacgcgctagtgaaggcctcggccggcgaggccgtcaccaagacgatctcggtgccg
atcactatcgtgaccaaggagaatgtcgagccgtaccgggccgtcttcaaatga
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