Rhizobium johnstonii: pRL90258
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Entry
pRL90258 CDS
T00402
Name
(GenBank) putative substrate-binding ABC transporter protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
pRL90258
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
pRL90258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL90258
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
pRL90258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Epimerase
ATP_sub_h
Motif
Other DBs
NCBI-ProteinID:
CAK03982
UniProt:
Q1M8Y3
LinkDB
All DBs
Position
pRL9:280293..281471
Genome browser
AA seq
392 aa
AA seq
DB search
MIARRSLIALSAGLVMSAGLGLPSYAEDTFKVGLILPMTGPFASTGRQVEAGAKAYIAAH
GDTVAGKKIELVVRDDAGTADQTRRIAQELIVNDKVNTLAGFGLTPLALSVAPVITQAKV
PAVVMAAATSSITQASEYFIRTSGTLPQYSVPVARWAHENNIKKVVTLVTDYGPGIDAET
WFTKEFKAKGGEVVEAVRIPLQNPDFAPFLQRVRDAKPDAVFVFLPSGVGSLFMKQFVDR
GLAEAGIKLIGTGDITDDDILNGMGKPALGTITAHFYAAAHDSPENAEFVKAFKAANNNM
RPNFMAMGGYDGMHAIYAALEATKGDADGAALIKAMKGLAWTSPRGPISIDPQTRDIIQN
IYMREVKDVNGELQNVEFATYKDVKDPVKAGQ
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
gtgattgccagaagaagtctgatcgccctgtccgcggggcttgtcatgtcggccggcctt
ggcctgccgtcctatgccgaggatacattcaaggtaggtctcatcctgccgatgaccggc
cccttcgcatcgaccggccgccaggtggaggccggcgccaaagcctatatcgctgcgcat
ggcgacaccgtcgccggcaagaagatcgaactcgtggtgcgcgacgatgccggcacagcc
gaccagacccgccgtatcgcccaggaactgatcgtcaacgacaaggtcaatacgcttgcc
ggcttcggactgacgccgctggcgctttccgtcgcgcccgtgatcacgcaggccaaggtg
cccgccgtcgtcatggccgccgctacctcgtcgatcacccaggcatcggaatatttcatt
cgcaccagcggcaccctgccgcaatattcggtgccggtcgcgcgctgggcgcatgaaaac
aatatcaagaaggtcgtaaccctggtgaccgattacggcccgggcatcgatgcggaaacc
tggttcaccaaggagttcaaggcaaagggcggtgaggtcgtcgaggccgtgcgtattcct
ctgcagaatccggatttcgcgcctttcctgcagcgtgtgcgcgacgccaagccggatgcg
gtcttcgtgttcctgccatccggcgtcggctcgctgttcatgaagcagttcgtcgaccgc
ggccttgccgaagcgggcatcaagctgatcggaaccggtgacattaccgacgacgacatc
ctgaacggcatgggcaagcctgcgctgggcaccatcacggcgcatttctacgcggctgca
cacgacagccctgagaacgccgaattcgtcaaggccttcaaggccgccaacaacaatatg
cgcccgaactttatggcgatgggtggttatgatggcatgcatgccatctatgccgcgctc
gaagccaccaagggcgatgcggacggtgcggcgctgatcaaggcgatgaagggccttgcc
tggacgagcccgcgcggaccgatctccatcgatccgcagacccgcgatatcatccagaat
atctatatgcgcgaagtcaaggacgtgaacggcgaactgcagaacgtcgaatttgcgacc
tacaaggatgtgaaggacccggtcaaggccggtcagtaa
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integrated database retrieval system
