Rhizobium leguminosarum bv. trifolii WSM1325: Rleg_1176
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Entry
Rleg_1176 CDS
T00926
Name
(GenBank) Peptidoglycan-binding LysM
Organism
rlg
Rhizobium leguminosarum bv. trifolii WSM1325
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Gene cluster
GFIT
Motif
Pfam:
Big_6
LysM
Big_13
Big_3_5
PycTM
TgpA_N
DUF6130
DUF948
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ACS55471
UniProt:
C6ATJ5
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Position
complement(1151693..1153723)
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AA seq
676 aa
AA seq
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MMKNRAGLLALAVLAIAILLMVFVVMPRIGGDATKVGDAINQASTELKNTVNEASKTSRS
AVGDAAAVADQVGRLSADAGVSLSELKALFADGKGPAIDVFTAAKTKAVNALTALAGFTI
PEGLDPATQTLAAKAKDGGAKALAIVRSLPENIADALAAIAKAEVALTGAPETAPGANTA
AENTGPKLPAFDVLRVEPDGSTVIAGSAEPNGKLEVLDGEKVVTTANVDASGDFAAVLDD
PLPAGDHQLVLKFTGKDGKSTLSEEVATISVPKDGNGANLLAMVSKPGAASRIITAPKAG
TEVADASNPMAPPADKPATGESSAAPTGELALQTPNLTDTPSGGADTAPAIPGTAAPDKT
NAPDVMVNAVEIEGNKIFIAGTTRSNAKVIGYADDSLVGQDTAGSDGHFVIDGVVALSVG
DHKIRVDVVDPTGKVIVRASVNFNRPAGDQVRVAAQSAPADANGASSMVPLDEGELRKLK
AEVGKAFGLLKGLFADGKLPGAEQLAAARSATDFALRSVADFRPAADAPDVFKQASGSSS
QVAGNALKLLQGLPGDAKSVGAALDKLGGMIAELTAAPAPATPSANEVGSNQPKTIEQAP
LTANNAAVIIRRGDTLWQISRRTYGLGVRYTTIYIANEDKIINPDRIRPGQIFGLPKDVL
PNAEELHRKRMSGQHL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaaccgtgccggcttgctggctcttgcagtcctcgcaatcgcaatcctactg
atggtgtttgtcgtcatgccgcgtatcggcggcgatgcaaccaaggtcggcgacgccatc
aaccaggcgagcacggagctcaagaacacggttaacgaggcgtcaaagacatcgcgctcc
gctgtgggcgatgcggctgcggtcgccgatcaggtcggccgcctttcggccgatgccggc
gtgtcgctcagcgagctcaaggcgctgtttgccgacggcaaaggccctgccatcgatgtc
ttcactgccgccaaaaccaaggccgtcaacgcgctgaccgcacttgccggcttcactatt
cccgagggcctcgatcccgcgacccagacccttgccgccaaggccaaggacggtggcgcg
aaggcgctcgccatcgtccggtcgctgcccgagaacatcgccgatgcgcttgccgcgatc
gccaaggccgaggttgcgctgaccggtgcgccggagaccgcccctggggcgaatacggca
gcggaaaataccggcccgaaacttcccgccttcgacgtattgcgcgtcgagcccgacgga
tcgacggtgattgccggttccgccgaaccgaacggcaagctcgaggtgctcgacggcgag
aaggtggtgacgacggccaatgtcgatgcgagtggcgattttgctgccgttctcgacgat
ccgcttccagccggcgaccaccagctggtgctcaagttcacgggcaaggacggcaagagc
acgctttccgaagaagtcgcgaccatttccgtgccgaaggatggcaatggcgccaatctg
ctcgccatggtttccaaacccggcgcggcgagccgcatcatcaccgcgccgaaggccgga
accgaagttgccgacgcctccaatccgatggcgccgcctgcggacaagccggcaaccggt
gaaagctcggctgcaccaaccggcgagctggcgctgcagacgccgaacctcaccgacaca
ccctccggcggcgctgatacggcaccggccattcccggcactgccgcaccggataagacg
aatgcacccgacgtgatggtcaatgccgtcgagatcgaaggcaacaagatcttcattgcc
ggcacgacgcgctccaatgccaaggtcatcggttatgccgacgacagcctcgtcggccag
gatactgccggctccgacggccatttcgtcatcgacggtgtggtggcgctttcggtcggc
gaccacaagatccgcgtcgatgtcgtcgatcccactggcaaggtgatcgtgcgtgcgtcg
gtgaatttcaatcgccccgccggcgatcaggtgagggtcgccgcgcaatcggcccccgca
gatgcgaacggtgcttcctcgatggttccgcttgacgaaggcgagctccgcaaactgaaa
gccgaagtcggcaaggccttcggcctgctgaaggggctttttgccgatggcaagttgccc
ggcgccgaacagcttgcggcagcacgctcggcaacggactttgcgctgcgctccgtcgca
gacttccgtccagcggccgatgcgcctgatgtcttcaagcaagcgtcaggttcctcctca
caggtcgccggcaatgcgctgaagctgctgcagggcctgcctggggatgcgaagtcggtc
ggcgccgcactcgacaagctgggcgggatgattgccgagctcaccgccgcacccgcgccg
gcaacgccgtctgcaaacgaggtcggaagcaaccagccgaagacgatcgaacaggcgccg
ctgacggcgaacaacgcggcggtcatcattcgccgcggcgacacgctttggcagatctcg
cgccgtacctatggtctcggcgttcgctacacgacgatctacatcgccaacgaggacaag
atcatcaatcccgatcgcatccgccctggccagattttcggcctgccgaaggatgtactg
ccgaatgccgaagagctgcaccgcaagcgcatgtccggccagcatctctaa
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