Rhizobium leguminosarum bv. trifolii WSM1325: Rleg_1423
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Entry
Rleg_1423 CDS
T00926
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rlg
Rhizobium leguminosarum bv. trifolii WSM1325
Pathway
rlg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rlg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rleg_1423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rlg03021
]
Rleg_1423
03400 DNA repair and recombination proteins [BR:
rlg03400
]
Rleg_1423
Enzymes [BR:
rlg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rleg_1423
Transcription machinery [BR:
rlg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rleg_1423
DNA repair and recombination proteins [BR:
rlg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rleg_1423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Apocytochr_F_C
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ACS55715
UniProt:
C6AUZ0
LinkDB
All DBs
Position
1419308..1423516
Genome browser
AA seq
1402 aa
AA seq
DB search
MNQEVMNLFNPQVPAQNFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRISTLLDMTLKDVERVLYFENYIVTEPGLTALKEHQLLSEEEYMLAVDEYGEDQFTA
MIGAEAIYEMLASMNLEKIAGDLRAELADTTSDLKQKKLMKRLKIVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSILNQNEPGEGMAFSDLGELHHALE
SKVVTLHTKIRGRFKSVDEDGKPYSKIYETTPGRLLIGELLPKNGKVPFDICNQEMTKKN
ISKMIDTVYRHCGQKDTVIFCDRIMQLGFAHACRAGISFGKDDMVIPDAKAKIVADTENL
VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEEMMARIKAVEFDEKTGRQKPMNSIY
MMSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVTHVDCGTQTGLTMTAIVDAGQVVASIGVRILGRT
ALDDIDHPVTGERIVDAGRMILEPDVVEIEKAGIQSIRIRSALTCEIQTGVCSVCYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGTVQIKNRN
ILRNSDGNLVAMGRNMTVQILDERGVERSSQRVAYGSKLHVDEGDKVKRGQRLAEWDPYT
RPMMTEVAGTVQFEDLVDGLSVLEATDESTGITKRQVIDWRSTPRGSDLKPAIVIKDASG
NIAKLSRGGDARFFLSVDAILSVEPGTKVSQGDVLARSPLESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTIRLGRDYKNKRRVIIEPAEDGVEPVEYLIPKGKPFHLQEGDYIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKVE
ITDAGDSTYIVGDNVDRIELEDVNDHLIEQGKKPAYGDPVLLGITKASLQTPSFISAASF
QETTKVLTEAAIAGKTDGLQGLKENVIVGRLIPAGTGGTMTQIRRIATSRDEMILEERRK
GTGAAVATPMLQDMAEKAPAAE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaatccgcaggtgcctgcacagaatttcgattct
attcggatttcgatcgcgtctccggagaagatcctctcctggtcttacggtgagatcaag
aagccggaaaccatcaactaccgtacgttcaagccggaacgtgacggtctgttctgcgcg
cgcatcttcgggccgatcaaggactacgaatgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgaaaagtgcggcgtcgaagtcacgctgtcgcgcgttcgccgt
gagcgcatgggccatatcgagctcgccgctcccgttgcccacatctggttcctgaagtcg
ctgccatcacgcatttcgacgctgctcgacatgacgctgaaggatgtcgagcgcgtcctc
tactttgaaaactacatcgtcaccgagccgggcctgaccgccctgaaggagcaccagctc
ctctccgaagaagagtacatgctcgctgtcgacgaatacggcgaagaccagttcaccgcg
atgatcggcgccgaggcgatctacgagatgctggcctcgatgaacctcgaaaagatcgct
ggcgacctgcgtgccgagcttgccgacaccacgtcggatctcaagcagaagaagctgatg
aagcgcctgaagatcgtcgagaacttcatggagtcgggcaaccgtccggaatggatgatc
atgaaggtcgttccggtcatcccgccggacctgcgtccgctggttccgctcgacggcggc
cgtttcgcgacgtcggatctgaacgatctctaccgccgcgtcatcaaccgtaacaaccgt
ctgaagcgcctgatcgagcttcgtgcgcctggcatcatcatccgcaacgaaaagcgcatg
ctgcaggaatccgttgacgcgctgttcgacaacggccgtcgcggccgtgtcatcaccggt
gctaacaagcgtccgctgaagtcgctctccgacatgctgaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggtcatcgtcaccggt
ccggagctgaagctgcaccagtgcggcctgccgaagaagatggcgctcgagctcttcaag
ccgttcatctatgcccgcctcgacgccaagggttactcctcgaccgtcaagcaggccaag
aagctggtcgaaaaggaaaagccggaagtctgggatatcctcgacgaggtcatccgcgag
catccggttctcttgaaccgcgcaccgacgctgcaccgcctgggcatccaggccttcgaa
cctatcctggtcgaaggcaaggcgatccagctgcatccgctcgtctgcacggccttcaac
gccgacttcgacggcgaccagatggccgttcacgtgccgctgtcgctcgaagctcagctc
gaagcccgcgtgttgatgatgtcgaccaacaacatcctgcacccggccaacggcgcgccg
atcatcgttccctcgcaggacatggttctcggcctctactatctgtcgatcctcaaccag
aacgagccgggcgaaggcatggccttctccgatctcggcgagctgcatcacgccctcgaa
agcaaggtcgtgacgctgcacaccaagatccgcggccgcttcaagtcggtcgacgaggat
ggcaagccttactcgaagatctatgagacgacgcctggccgtctgctcatcggcgaactg
ctgccgaagaacggcaaggtgcccttcgatatctgcaaccaggaaatgaccaagaagaac
atctcgaagatgatcgacacggtctatcgccattgcggccagaaggacacggtcattttc
tgcgaccgcatcatgcagctcggcttcgcccacgcctgccgcgccggcatttcgttcggc
aaggacgacatggtcattccggatgccaaggccaagatcgttgccgacaccgaaaacctg
gtgaaggaatacgagcagcagtacaatgacggcctcatcacccagggcgagaagtacaac
aaggttgtcgacgcctggggtaaggcgaccgaaaaggtcgccgaagagatgatggcccgc
attaaggcggtcgaattcgacgagaagaccggtcgccagaagccgatgaactcgatctac
atgatgagccactccggtgcccgcggttctccgaaccagatgcgccagctgggcggcatg
cgtggcctcatggccaagccgtcgggcgaaatcatcgagaccccgatcatctcgaacttc
aaggaaggcctgaccgtcaacgagtacttcaactcgacgcacggcgcccgtaagggtctg
gcagacaccgccctgaagaccgccaactccggctacctgacccgccgtctcgtcgacgtc
gcgcaggattgcatcgtcacgcatgtcgattgcggaacgcagacgggcctcaccatgacc
gccatcgtcgatgccggtcaggtggttgcctcgatcggcgtccgtatcctcggccgcacg
gcgctcgacgacatcgatcatccggtcacgggtgagcgcatcgtcgatgccggcaggatg
atcctcgagcccgacgtcgtcgaaatcgagaaggccggcatccagtcgatccgcatccgc
tcggcactgacctgcgaaatccagacgggcgtctgctcggtctgctacggccgcgacctt
gcgcgcggtacgccggtcaatatgggcgaagccgtcggcgttatcgctgctcagtcgatc
ggcgagccgggcacccagctcaccatgcgtaccttccaccttggcggtacggcaaccgtg
gtcgaccagtcgttcctcgaagcctcgtacgaaggtacggtgcagatcaagaaccgcaac
attctgcgcaactccgatggcaacctcgttgccatgggccgcaacatgaccgtccagatc
ttggacgaacgtggtgtcgagcggtcgtcgcagcgtgtggcctacggttcgaagctgcat
gtcgacgaaggcgacaaggtcaagcgcggccagcgtctggcagagtgggacccctacacc
cgtccgatgatgacggaagtggctggtaccgttcagtttgaagatctggtcgacggtctc
tccgttctggaagcgaccgacgaatcgactggcatcaccaagcgtcaggttatcgactgg
cgttcgaccccgcgcggctcggacctcaagccggcgatcgtcatcaaggatgccagcggc
aatatcgcgaagctctcccgtggtggtgacgcccgcttcttcctctcggtcgatgcgatc
ctgtcggtcgagccgggcacgaaggtctcccagggtgacgttctcgcccgttcgccgctc
gaaagcgccaagaccaaggacatcaccggcggtctgccgcgtgttgccgagctgttcgaa
gcccgccgtccgaaggaccacgccatcatcgcagagatcgatggtacgatccgcctcggc
cgcgactacaagaacaagcgtcgcgtcatcatcgagccggcggaagacggtgtcgagcct
gtcgaatacctgattccgaagggcaagcccttccaccttcaggaaggcgactatatcgaa
aagggtgactacatcctcgacggtaacccggctccgcacgacatcctggcgatcaagggc
gtggaggctctggcctcctacctcgtcaacgagatccaggaagtctaccgcctgcagggc
gtcgtcatcaacgacaagcacatcgaggtgattgtccgtcagatgctgcagaaggtggaa
atcaccgatgcaggcgactcgacctatatcgtcggcgacaatgtcgaccggatcgagctc
gaagacgtcaacgatcacctgatcgagcagggcaagaaaccagcctatggcgatccggtt
cttctcggcatcaccaaggcatcgctgcagaccccgtccttcatctcggccgcgtccttc
caggaaacgacaaaggtgctgacggaagctgcgatcgccggcaagaccgacggtctgcag
ggtctgaaggaaaacgtcatcgtcggccgccttatcccggccggcactggcggcaccatg
acccagatccgccgcatcgccacgtcgcgcgacgagatgatcctcgaagagcgccgcaag
ggtacgggtgctgccgttgccacgccgatgctgcaggacatggccgaaaaggctccggct
gcggaataa
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integrated database retrieval system
