KEGG   Rhizobium leguminosarum bv. trifolii WSM1325: Rleg_4258
Entry
Rleg_4258         CDS       T00926                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rlg  Rhizobium leguminosarum bv. trifolii WSM1325
Pathway
rlg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rlg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Rleg_4258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rlg03021]
    Rleg_4258
   03019 Messenger RNA biogenesis [BR:rlg03019]
    Rleg_4258
Transcription machinery [BR:rlg03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Rleg_4258
Messenger RNA biogenesis [BR:rlg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Rleg_4258
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 NACHT S1CSD-TOTE-2 DUF6360 AAA
Other DBs
NCBI-ProteinID: ACS58498
UniProt: C6B0Z4
LinkDB
Position
complement(4362694..4363959)
AA seq 421 aa
MAEMKLQELKSKSPTDLLAFAESLEVENASTMRKQELMFAILKMLASQDVEIIGEGVVEV
LQDGFGFLRSPNANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEQIRHKVHFDNLTPLYPNERFKMELDIPTTKDLSPRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAVEFLIDKLKQTKNNSDFFESMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagcttcaggaacttaagagtaaatccccgacggatctgctggcattt
gccgaatcgctcgaggtcgagaacgcaagcacgatgcgcaagcaggagctgatgtttgcg
atcctcaagatgcttgccagccaggatgtcgaaatcatcggcgaaggcgtcgtcgaagtg
ctgcaggacggtttcggcttcctgcggtcgcccaatgcgaactacctgccgggcccggat
gatatttatatctccccgtcgcagatccgccgtttctcgctgaaaaccggcgatacggtc
gaaggcccgatccgtggaccgaaggagggtgagcgctatttcgcgctgctcaaggtcaac
accatcaatttcgacgatccggaacagatccggcacaaggtccatttcgacaatctgacg
ccgctctatccgaacgagcgcttcaagatggaactcgatattccgaccaccaaggatctg
tcgccacgtgtaatcgacctggtggcgccgcttggcaagggccagcgtggattgatcgtc
gcgccgccgcgtaccggcaaaaccgtgttgttgcagaacatcgcgcattcgatcaccgcc
aaccatccggagtgctatctgatcgtcctgctgatcgatgaacgccccgaagaagtgacc
gacatgcagcgctcggttcgcggcgaggttatctcctcgaccttcgacgaaccagccgtc
cgtcacgtgcaggtggccgagatggtcatcgagaaagccaagcgccttgtcgaacacgga
cgcgacgttgtcatcctgctcgattcgatcacgcgcttgggccgtgcctataacacggtc
gttccctcttcaggcaaggtccttaccggcggtgtggacgccaacgctctgcagcggccg
aagcgcttcttcggcgcggcccgtaacatcgaggaaggcggctctttgacgatcatcgcg
accgcgctgatcgataccggcagccgcatggacgaagtgatcttcgaagaattcaagggc
acgggcaactcggaaatcgtcctcgatcgcaaggtcgccgataagcgtatcttcccggca
atggacatcctgaagtccggaacgcgcaaggaggaccttctggttccgcgccaggatctg
cagaagatcttcgtgctccgccgcatccttgctccgatgggcacgaccgatgcggtcgag
ttcctgatcgacaagctcaagcagacaaagaacaattccgacttcttcgaatcgatgaac
acataa

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