Rhizobium leguminosarum bv. trifolii WSM1325: Rleg_4639
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Entry
Rleg_4639 CDS
T00926
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rlg
Rhizobium leguminosarum bv. trifolii WSM1325
Pathway
rlg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rleg_4639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlg03400
]
Rleg_4639
Enzymes [BR:
rlg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Rleg_4639
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Rleg_4639
DNA repair and recombination proteins [BR:
rlg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rleg_4639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ACS58875
UniProt:
C6B467
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All DBs
Position
4764069..4764959
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AA seq
296 aa
AA seq
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MPELPEVETVKRGLTPAMEGTRVTRLELRRGDLRFPFPDAFADRVSGRTIVGLGRRAKYL
LVDLDDGNTLISHLGMSGSFRIEEGAVSGMPGEFHHARSKDEKHDHVVFHLQGLGGPRRV
VYNDPRRFGFMDMVGRADLAAHPFFRDLGPEPTGNELGAAYLAERFRDKAQPLKSALLDQ
KNIAGLGNIYVCEALWRAHLSPIRAAGTLVTPGGRPKAQLDLLVASIRDVIADAIAAGGS
SLRDHIQTDGSLGYFQHSFSAYDRESQACRTPGCGGTVARIVQAGRSTFYCATCQK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccagaagtcgaaacggtgaaacgcggcctgacgccggcgatggagggc
acgcgcgtcaccaggctggagctgcgccgaggcgatctgcgcttcccctttcccgacgct
ttcgcagacagggtttccggccgcaccatcgttggccttggccgccgcgccaaatatctg
ctggtcgatctcgacgacggcaacacgctgatttcgcatctcggcatgtccggttcgttt
cgcatcgaggagggtgcagtctccggcatgccgggcgaattccaccatgcccgctcgaag
gacgagaagcacgatcacgtcgtcttccatctgcaaggtttaggcggcccgcgccgcgtc
gtctataacgatccgcgccgtttcggcttcatggatatggtgggacgtgccgatctcgcc
gctcatcccttcttccgcgatctcggcccggagccgacaggaaacgagcttggcgccgcc
tatctggctgaacgcttccgcgacaaggcgcagccgctgaagagcgcgctgcttgaccag
aagaacattgccggtctgggcaacatatatgtctgcgaggcgctttggcgcgcgcatctt
tcgccgatccgcgccgccggtacgctggtgacgccagggggccggccgaaggcgcagctc
gacctgctcgttgcctcgatccgcgacgtcatcgccgatgcgatcgccgccggcggatcg
tcgctgcgcgaccatatccagaccgacggatcgctcggctatttccagcattccttctcc
gcctatgatcgcgaaagtcaggcttgccgcacgcccggctgcggcggtacggtcgcccgc
atcgtccaggcaggtcgctccaccttctattgcgccacctgtcagaagtaa
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