Rhizobium leguminosarum bv. trifolii WSM1325: Rleg_5468
Help
Entry
Rleg_5468 CDS
T00926
Name
(GenBank) pathogenesis-related protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rlg
Rhizobium leguminosarum bv. trifolii WSM1325
Pathway
rlg03420
Nucleotide excision repair
rlg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rleg_5468
03430 Mismatch repair
Rleg_5468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlg03400
]
Rleg_5468
Enzymes [BR:
rlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rleg_5468
DNA repair and recombination proteins [BR:
rlg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rleg_5468
MMR (mismatch excision repair)
Other MMR factors
Rleg_5468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
UvrD_C_2
UvrD_C
AAA_11
Chol_subst-bind
Motif
Other DBs
NCBI-ProteinID:
ACS60288
UniProt:
C6B8Q0
LinkDB
All DBs
Position
pR132503:complement(51542..53461)
Genome browser
AA seq
639 aa
AA seq
DB search
MSPLAIKRGAPDTDRDADLAISACLNPNDPKSFFLYAGAGSGKTRSLKEALDGFRDRHGD
EFRRAGKKVAVITYTNAAADEIAARVGQDTLFPISTIHSFCWSHIGTYYTDIQAWLLATL
PNDLADLREKQSKGRAGTKAADDRERAIAATIKRLGWLSVPRRFTYSPNGDNFGADSLSH
SEVLKITATFILAKPAMQAVLVNRFPFLLIDESQDTNKILIDAFFALAATNRGKFALGLF
GDTMQRIYADGLPDLGRNIPPEWARPVKRMNHRSPQRIVQLGNSLRSAVDNQIQLARDDS
MVGTVRLFIIAADATDKPDKERKARERMAELCGDAGWKEDATVKTLTLEHHMAASRRGFA
PMFQALDKDSRLSTGLRTGELAGLRLFTERVAPLLAASTAGEEFAVMAHLRKNSPLLKRS
VLANSTTPDDPLLPARVAVGALLALDPENPSTRLLDILECVAEHRLFEIPAAMRPFIETE
PAPVAPETTVQNLEDNEAEEEAETSPSSLQAWRAFLETPYNQIAPYAEYISNRGPFGTHQ
GVKGLQFDRVLVILDDSEARGFLFSYEKLFGAKPLSDQDRKNAAEGADTGIDRTRRLLYV
TCTRAEKSLALVAYTESPDTLAAAVIKQGWFSADELERL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtccactcgccatcaaacgtggtgcgcctgataccgaccgcgacgccgatctcgcg
atcagcgcatgtttgaacccaaacgatccgaaaagtttctttctctatgcaggcgccggt
tcaggtaaaacgcgctcgctcaaagaggcgctcgacggtttccgcgatagacatggggac
gagtttcggcgagccgggaaaaaggttgcggtcatcacctataccaatgcggcagccgat
gagatcgctgcgcgcgttggccaggacaccctattcccgatatcaaccatacacagcttt
tgctggtcgcatattggcacgtactacaccgatattcaggcttggctgctggcaacgctc
cctaacgatctcgccgacttacgtgaaaagcagtccaaaggacgcgctggcacaaaggct
gcggacgaccgcgaacgagcgattgccgcgacgatcaaacggctcggctggctcagcgtc
cctcggcgtttcacctacagccctaacggcgataacttcggtgcggattcgctgtcccat
tccgaggttttaaagatcacggcgaccttcatcttggcaaagcccgcaatgcaggccgtg
ctggtgaataggtttccatttttgctgatcgatgaaagccaagacaccaacaagatactc
attgacgcattcttcgctttggcagcaacaaacaggggcaagtttgcactcggtcttttt
ggagacaccatgcagcggatctacgctgacggcctcccagatctcggacggaacattcca
ccggaatgggcacggccggtaaagcgcatgaatcaccgatctccccaacgtattgtgcaa
ttaggcaattcactgaggtccgccgtggataaccaaatccaactggcgcgcgacgacagc
atggtgggcaccgtcagactcttcatcattgcggcggatgcaaccgacaaacctgacaag
gagcgaaaggcgcgcgagcgcatggccgagctatgtggtgacgccggttggaaagaggat
gccaccgtcaaaacacttacattggaacatcatatggcggcgtcgcgtcgtggcttcgcg
ccgatgttccaggccttggacaaggattcccggctctcgacgggcctgaggaccggcgaa
ctcgctggactgcgtctctttaccgagcgcgtagcgcctctccttgcggcatcgaccgct
ggcgaggagttcgccgtcatggctcatctccgcaagaactccccccttttaaaacggtcg
gtgctagccaatagcacgaccccggacgatcccctcctgcctgcccgagtagcagttggg
gcgcttctcgcgttagacccggagaatccctcgacgcggcttctcgatattctcgagtgt
gttgccgaacatcgactattcgaaatcccggcagcaatgcgtccatttatcgagactgaa
ccagcgccagttgcgccggaaacgactgttcaaaatctcgaggataatgaggccgaggag
gaagccgagacctccccttctagtttgcaggcatggcgggccttccttgagacgccctac
aatcagatcgctccatacgccgagtatatcagcaatcgtggtccatttggcacacaccag
ggcgtcaaggggcttcagttcgaccgcgtgctagtcatcctcgacgatagcgaagcgaga
ggcttccttttctcatatgaaaaactgttcggtgccaaaccactctcagaccaagaccgg
aagaatgcagccgagggcgccgatacaggcatcgaccggactaggcgacttctctacgtc
acttgtacacgcgccgagaaaagcttggccctcgttgcctataccgagagccctgacacg
cttgctgctgcggtgatcaaacaaggatggttcagcgccgatgaacttgagcggctgtga
DBGET
integrated database retrieval system
