Rhizobium leguminosarum bv. trifolii WSM1325: Rleg_7058
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Entry
Rleg_7058 CDS
T00926
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rlg
Rhizobium leguminosarum bv. trifolii WSM1325
Pathway
rlg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rlg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Rleg_7058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlg03019
]
Rleg_7058
03009 Ribosome biogenesis [BR:
rlg03009
]
Rleg_7058
04131 Membrane trafficking [BR:
rlg04131
]
Rleg_7058
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rlg04147
]
Rleg_7058
Messenger RNA biogenesis [BR:
rlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Rleg_7058
Ribosome biogenesis [BR:
rlg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Rleg_7058
Membrane trafficking [BR:
rlg04131
]
SNARE
SNARE associated proteins
Others
Rleg_7058
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Rleg_7058
Exosome [BR:
rlg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Rleg_7058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_2
AAA_22
CDC48_N
CDC48_2
AAA_14
IstB_IS21
TIP49
AAA_33
AAA_28
AAA_lid_PRS2_C
nSTAND3
ABC_tran
NPHP3_N
Mg_chelatase
RNA_helicase
AAA_18
AAA_7
DUF815
AAA_3
AAA_24
AAA_17
PhoH
Zeta_toxin
Sigma54_activat
AAA_30
AAA_19
Sigma54_activ_2
TsaE
Parvo_NS1
bpMoxR
ATPase_2
ATP-synt_ab
SLFN-g3_helicase
Vps4_C
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ACS60068
UniProt:
C6B7L0
LinkDB
All DBs
Position
pR132502:complement(471330..473444)
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AA seq
704 aa
AA seq
DB search
MVGKRHTAAVAVRPYPEDEGLNIIRLDGLQRVNAGATSGDHIEVRKAEARPAARIVLAPA
QKNLVLQGSGDALQRVFLRQPMVAGDVVSTSVQQRSRDPRMLQAYGLQEIRLVVVSTHPR
GVVQVNEQTVVELRPQYEEPKEARRADVTYDDIGGLGSSVEQVREMVELPLRHPELFQRL
GIDPPKGVLLYGPPGTGKTLLARAVANETEANFFHIAGPEIMGSKYGESEERLRQVFQEA
SQNAPSIIFIDEIDSIAPKREQVTGEVERRIVAQLLTLMDGLEPRQNIVVIGATNRRDAI
DEALRRPGRFDREIVIGVPDQNGRREVLAIHTRGMPLTEDADLDEIARTTYGFVGADLGA
LVREAAMDALRRVLPDINLKEGIPPEILEKLIVSHDDFMSAMKRIQPSALREIMIQAPNV
RWEDVGGLDDAQMKLREGVELPLRAPQSFKRMGIRPAKGFLLFGPPGTGKTLLAKAVARE
AEANFVATKSSDLLSKWYGESEQQVSRLFERARQVAPTVIFIDEIDSLAPARGGGLGEPA
VTERVVNTLLAEMDGLEDMQGVVVMAATNRPNLLDPALLRPGRFDELVYVPVPDTKARLK
ILGIHTKKMPLAADVDLDDLAAKTERFTGADLEDLTRRAGLIALRQSLDAEIVTSANFAK
ALEEVRPSVTPEVEREYEEMLRTLRQENPQRMQIGFTPLKISGK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttggttggcaagcgtcacacggctgctgtggccgtgcgaccataccccgaagacgaggga
ctgaacatcatccgtctcgacggtctccagcgggtgaacgctggtgccacgagtggagac
cacattgaagttcgaaaagctgaggcccgaccagccgcgaggattgtactggcaccagct
cagaagaaccttgtgcttcaaggatcgggcgatgctctgcagcgcgtctttttgcgtcag
ccgatggtcgcgggggatgtggtctcgacctcggtccagcagaggagccgagatccccga
atgcttcaggcctatggcctccaggaaatccgactggtggttgtctcgacacatccccgc
ggcgttgtgcaagtcaacgagcagaccgttgtggaactgcgaccacagtacgaggagccc
aaggaggcgcggcgggcggatgtaacatacgacgatattggcgggctaggctcctcggtt
gagcaagtccgcgagatggtggagcttccattgcgccaccccgagctctttcaacgcctt
ggcatcgatccgccgaagggtgtcctgctttacgggccgcccggcaccggaaagacgctg
ctcgctcgcgcggtcgccaatgaaactgaggcgaatttctttcacatcgccggtcctgag
attatggggagcaaatacggggaatccgaagaacgtcttcggcaggtctttcaggaagca
tcacaaaacgcaccatcaatcatctttatcgacgaaatcgactccattgctccgaagagg
gaacaggtcacaggagaggtcgagcgacggatcgttgcgcaattgctgacgttgatggac
ggcctggaaccgcgtcagaatatcgttgtcattggtgcaacgaaccggcgcgacgccatt
gacgaggctctacgcaggccgggtcgcttcgaccgggaaatcgtcatcggtgtgccggac
caaaatggcaggagggaagtcctcgcaatccacacacgcggcatgccgctcaccgaagat
gcggatcttgatgaaatagcacggacgacatatggtttcgtcggcgcagatctcggtgct
ctcgtgcgagaggccgcaatggatgccctacggcgggtcttgcccgatataaatctcaag
gaaggcatcccgcctgagatccttgaaaagcttatcgtctcgcacgacgacttcatgtct
gcaatgaagcgaattcagccgtctgcgttgcgcgagatcatgatccaggcacccaatgtg
cgctgggaggatgtcggcggtctagatgacgcacaaatgaagttgcgggaaggggtggag
cttcccctccgcgccccacagtcattcaaacggatgggtattcgacccgccaagggcttt
ctgctgtttggtcctccgggcacgggcaagacgctgctcgcaaaggcggttgcccgcgag
gccgaggcaaattttgtcgcgaccaaatcctcggatttgctgtcaaagtggtacggcgag
tccgagcagcaggtgtcgcgcctcttcgaacgagcacgtcaggtcgctccgacggtaatt
ttcattgacgagatcgattccctagcccctgcaagaggaggtggcctcggagagcctgcg
gtcacagagcgtgtggtgaatacgctattggcggaaatggacggcttggaagacatgcag
ggggtcgtggtcatggccgccaccaaccgtcccaacctattggatccagccctgctgcgg
ccaggccggttcgatgagcttgtgtatgtgcccgtgcctgataccaaggcgagattgaaa
atccttggaattcacaccaagaagatgcctctcgccgctgacgtggacctggatgacctt
gcggcgaagactgaacgctttactggcgctgatctggaagacttgacacgtagggccggc
ctgatcgcgcttcgtcagtccctggacgccgagatcgtgacaagtgcgaacttcgctaaa
gcactcgaagaagttcggccgtccgtaacacccgaggtcgagcgcgaatacgaggaaatg
cttcggactctgagacaggaaaacccccagcgaatgcagatcggatttacaccgttgaag
atttcaggaaaatag
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