Rhodoferax lithotrophicus: MIZ03_0138
Help
Entry
MIZ03_0138 CDS
T10289
Name
(GenBank) hypothetical protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MIZ03_0138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlh03400
]
MIZ03_0138
Enzymes [BR:
rlh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MIZ03_0138
DNA repair and recombination proteins [BR:
rlh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MIZ03_0138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLFN_AlbA_2
HATPase_c_4
HTH_24
HTH_11
DDRGK
HTH_20
HTH_23
DUF977
HTH_DeoR
Sigma70_ECF
HTH_AsnC-type
MarR
HTH_Crp_2
MarR_2
HTH_Cmi2_C
HTH_5
Rrf2
HTH_Mga
Sigma70_r4_2
HTH_10
HTH_Tnp_ISL3
PCI
Motif
Other DBs
NCBI-ProteinID:
BCO25278
LinkDB
All DBs
Position
145740..147179
Genome browser
AA seq
479 aa
AA seq
DB search
MHSMTVTTLLTLVAKGESLTLELKKSTAEKDRAYRTLCAFANGQGGQLVFGVTPAGKVIG
QRVTDRTLEELAQELQCFEPPLFPRVQRIQVADGLEALLLEVDPATHGPVSFRGVPYERV
LNTTRVMSRSTYQTLLLESLHASQRWETQPATGWSVSQLDTHEMVLTLEEAIRRGRSVDP
GTRDPLEILRGLGLLVAGGQVSRAAVALFCQGEQPLPDFTQLTLRLARFKGCERNEFLDN
RQFHGNAFELMRRAERFLIDWLPVAGRIVPGQLQRVDTPSLPVEALREALANAFVHRDYA
SGSGSVAVALFDDRLEIISSGELHFGLTPEMLFQPHESRPWNPLIASVFYRRGHIESWGR
GTLKFIRLMQEAGLAPPTLKVQAGFVTVTFALSASLAPRMQDNISGKTSEKTSEKTSEKT
SEKILAAVRENEQITIAELAALLDISTRSVERQLRQLQDVHRLKRIGADKGGYWQVVDP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcactcaatgaccgtgaccaccctcctgactctggtcgccaaaggcgaatccctgacg
ctggaactcaaaaagtccaccgccgaaaaagaccgcgcttatcgcaccctgtgtgctttt
gccaacgggcaaggtgggcaactggtgtttggggtcacacctgcgggcaaggtgatcggc
cagcgtgtgaccgaccgcacgcttgaagagctggcgcaagagctgcagtgctttgagccg
ccactgtttccccgcgtgcagcgcatccaagtggccgatgggctggaggccttgctgctg
gaggttgaccctgccacacatgggccggtgtcgtttcgcggtgtgccctatgagcgggtg
cttaacaccacccgcgtgatgtcgcgcagcacctaccaaaccctgttgcttgaatcgctg
cacgccagccagcgctgggaaacccaaccggccaccggctggagcgtgagccagttggac
acgcacgaaatggtgttgacgctggaagaagccattcgccggggccgcagcgttgacccc
ggtacccgtgatccgctggaaattttgcgcgggctggggctgctggtggcaggtggacaa
gtgtcccgcgcggcggtcgcgctgttttgccaaggtgagcagcccttgccagatttcacc
cagctcactttgcgcctggcccgcttcaagggctgtgagcgcaacgagtttttggacaac
cgccagttccacggcaacgcctttgagctgatgcgacgggccgagcgttttttgatcgac
tggttgccggtggccgggcgcatcgtgccggggcaattgcagcgtgtggacacccccagt
ctgccggtggaggcgctgcgcgaagcgctggccaacgcctttgtacaccgcgactatgcc
agcgggtctggctcggtggcggtggcgttgtttgatgaccggctggaaatcatctcatct
ggcgagctgcactttggcctgaccccggagatgctgtttcagccccacgaatcccgcccc
tggaacccgctgattgccagcgtgttttaccggcgcggccacatcgagagctggggccgg
ggcacattgaaattcatccggctgatgcaagaggccgggctggcaccgcccaccctgaag
gtgcaggcgggctttgtgacggtgacgtttgccttgtccgccagccttgcgccccgcatg
caagacaacatctctggaaaaacgtcggagaaaacgtcggagaaaacgtcggagaaaacg
tcggagaaaattttggccgcagtgcgcgaaaacgagcagatcaccattgcagagctggcc
gcgctgctggacatcagcacccggtcggtggagcgccagttacgccagttgcaagacgtt
caccgcctcaagcgtatcggcgctgacaagggtgggtactggcaggtggttgacccatga
DBGET
integrated database retrieval system
