Rhodoferax lithotrophicus: MIZ03_0189
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Entry
MIZ03_0189 CDS
T10289
Name
(GenBank) hydroxymethylglutaryl-CoA lyase YngG
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00280
Valine, leucine and isoleucine degradation
rlh00650
Butanoate metabolism
rlh00907
Pinene, camphor and geraniol degradation
rlh01100
Metabolic pathways
rlh01120
Microbial metabolism in diverse environments
rlh04146
Peroxisome
Module
rlh_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MIZ03_0189
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MIZ03_0189
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MIZ03_0189
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MIZ03_0189
Enzymes [BR:
rlh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
MIZ03_0189
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
BCO25329
UniProt:
A0ABN6D090
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Position
complement(202430..203398)
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AA seq
322 aa
AA seq
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MAKGCCLPAHVSIHDVVVRDGFQSEPHFISTDAKIALIDRLSTTGLSKIEITSFVSAKAV
PNLRDATEVCRGVIRRPNVRFVALVPNVLGCERALACDIDEINLVMSLSESHNMANMRMS
TTQSLKQFADVMALTKSTRTQVNGTIATAFGCPFEGVQDQERVLATVQAYLDLGMNSITL
ADTTGMANPQQVCRMAYAFLARFPQVPLTMHFHNTRGMGLANVLAAVASGVKSFDASLGG
LGGCPYAPGATGNICTEDTVHMLHACGVATGIDLDLLLGIARDLSTIVGHEVPGQLVRSG
KSTDLHPCPASVISLRAAQATV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggctgctgtttgcctgctcacgtcagcatccatgacgtggtggttcgtgat
ggttttcagagtgaaccccatttcatttccacggatgccaagatcgctttgattgatcga
ctctcaaccactggcttatccaagatagaaatcacctcgtttgtttcggccaaggctgtc
cctaacctacgtgacgctacggaggtgtgtcgtggcgtgattcgccgcccgaatgtgagg
ttcgtcgccctggttcccaacgtgctgggttgtgagcgggcgctggcatgtgacatcgac
gagatcaacctggtcatgtccctcagtgaaagccacaacatggccaacatgcgcatgagc
acgacgcagtccctcaagcagttcgccgatgtgatggcgctgaccaagtcgacccgtaca
caggtcaacggcaccatcgccacagccttcggctgccccttcgagggagtgcaggatcaa
gagcgggtactggccaccgttcaggcttacctagacctgggcatgaacagcatcaccctg
gccgacacgaccggaatggccaatccacagcaagtctgtcgcatggcatatgcctttttg
gcccgtttcccgcaggtgccactgaccatgcattttcacaacacccgtggcatgggtttg
gccaatgttctggccgccgtggccagtggtgtgaaaagtttcgacgcctcactgggcggt
ttgggtggctgcccctatgcgccgggcgcaacaggcaacatttgcaccgaagacacggtg
cacatgctgcatgcctgtggcgtggctaccggcattgacttggatttgttgttgggtatt
gcccgggatttatcaaccattgttggccacgaggttccgggacaactggtgcgctcggga
aagtccactgatctgcacccgtgtccggcctccgtgatctccttgcgggcggcgcaggcc
accgtttga
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