Rhodoferax lithotrophicus: MIZ03_0464
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Entry
MIZ03_0464 CDS
T10289
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MIZ03_0464
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rlh01007
]
MIZ03_0464
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlh03016
]
MIZ03_0464
Enzymes [BR:
rlh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
MIZ03_0464
Amino acid related enzymes [BR:
rlh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
MIZ03_0464
Transfer RNA biogenesis [BR:
rlh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
MIZ03_0464
Prokaryotic type
MIZ03_0464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BCO25603
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All DBs
Position
491736..494693
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AA seq
985 aa
AA seq
DB search
MGGNQAKHTMNDELQQPGLNSLSKSFEPAALEAHWGPEWEKRGYGVAGSRGTGQPSAEAA
ARGDNFCIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMAGFNTAWIPGTDHAGIATQIV
VERQLQAQGISRHDMGPTPAEARKNFVAKVWEWKEKSGNTITTQMRRMGDTVDWSREYFT
MDEKLSKTVTETFVRLYEQGLIYRGKRLVNWDPVLMSAVSDLEVESEEEDGSLWHILYPF
ADGPQLVNGELAPGLVVATTRPETMLGDVAAMVHPEDERYAHLIGKQVTLPLCNRTIPII
ADDYVDKAFGTGVVKVTPAHDQNDYQVGQRHKLPMICVLTLDAKIDSNAPSAYVGLDRFA
ARKQIVKDLQALELMVEIKKHKLMVPRCARTGQVIEPMLTDQWFVAMSKVSEQDPTGKSI
TQKAIDAVQSGQVKFVPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYAEDGAVFVAR
DADSASAAALKAGYTGPLKRDEDVLDTWYSSALVPFSTMGWPETTPDYDLYLPSSVLVTG
YDIIFFWVARMIMMTTHFTGKVPFKHVYIHGLVRDAQGHKMSKSEGNVLDPVDLIDGIAL
PELLVKRAEGLRKPETAPQVRKNTEKEFPNGIPAFGADALRFTFASLASLGRSINFDSKR
CEGYRNFCNKLWNASRFVLMNCEGQDCGLNDHTPTECATAAYLDFSQADRWIVSLLQKAE
AEVTQGFADYRLDNVASTIYDFVWNEFCDWYLEIAKVQIQTGDDAQKRATRRTLIRTLET
ILRLAHPIIPFVTEELWQKVAPVAGRAGASIAIAAYPVSQPERIDEAAIAHVAKLKTLVD
ACRNLRGEMQVSPAQRLPLFVMASAAESAFMKNAAPVLQALAKLSEVCVFDDEATWAAAA
QAAPVAVVGEARICLFMEIDVAAEKLRLGKELARLEGEIGKANGKLGNESFVARAPAAVI
DQERKRLADFEATLAKVKDQLTRLG
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaaccaagccaaacacaccatgaacgacgaactacaacaacccggcctcaac
agcctgtccaaatccttcgagcccgccgccctggaagcccattgggggccggagtgggaa
aaacgtggctacggcgtggccggtagccggggcacgggccagcccagtgcggaggctgcc
gcccgcggcgacaacttctgtatccagctgcctccccccaacgtgaccggcacgctgcac
atgggtcatgcgttcaaccagaccatcatggacagcctgacgcgctaccaccgcatggcc
ggcttcaacaccgcctggattcccggcaccgaccacgccggtattgccacccagatcgtg
gtggagcgccagctgcaagcccagggcatcagccgccatgacatgggcccgacacctgcc
gaagcccgcaagaactttgttgccaaggtctgggagtggaaagaaaaaagcggcaacacc
atcaccacccaaatgcgtcgtatgggcgacacggtggactggagccgcgaatacttcacc
atggacgagaagctgtccaaaaccgtcaccgaaacctttgtgcgcctgtacgagcagggc
ctgatctaccgtggcaaacgcctggtcaactgggatccggtgctgatgagcgccgtgtct
gacctggaagtggaatcagaggaagaagacggcagcctgtggcacatcctctaccccttt
gccgatggcccacaactggtcaacggtgaactcgcccccggcctggtcgtggccactacc
cgccccgagaccatgctgggcgacgtggccgccatggtgcacccagaggacgagcgctac
gcgcatctgatcggcaaacaggtcaccctgcccctgtgcaaccgcaccatcccgatcatt
gccgacgattacgtggacaaggctttcggcaccggcgtggtgaaagtcaccccggcgcac
gaccagaacgactaccaggtcggccagcgccacaagctgccaatgatctgcgtactgacg
ctggatgccaaaattgacagcaacgcaccgtctgcttatgttggactggatcgttttgca
gcccgcaagcaaatcgtcaaagacctgcaagcgctggagctgatggtcgagatcaaaaaa
cacaagctgatggtgccgcgctgcgcccgcaccggccaggtgatcgagccgatgctcacc
gatcagtggtttgtggcgatgagcaaagtgtccgaacaagacccgaccggcaagagcatc
acgcaaaaagccatcgatgcggtgcagtcgggccaggtgaagtttgttcccgagaactgg
gtcaacacttacaaccagtggatgaacaacattcaggactggtgcatcagccgccagctc
tggtggggccatcagattcccgcctggtatgccgaagatggtgctgtttttgtagcgcgt
gacgcagattccgcaagcgctgcagctttaaaagccggttataccgggccattgaagcgt
gatgaagacgtgctcgacacctggtactccagcgctttggtgcctttcagcaccatgggc
tggccggagaccacaccggactatgacctttacctgcccagcagcgtgctggtcaccggc
tacgacatcatcttcttctgggttgcccggatgatcatgatgaccacccactttaccggc
aaagtaccgttcaaacacgtctacatccacggtctggtgcgtgacgcgcaaggccacaag
atgagcaagagtgagggcaacgtgctcgacccggtggacctgatcgacggcattgccctg
cccgagctgctggtcaaacgtgccgaaggcctgcgcaagcccgaaactgcaccgcaggtg
cgcaaaaacaccgaaaaagaattccccaatggcatccccgcctttggtgccgatgccttg
cgtttcaccttcgcgtccctggcttctctgggccgctctatcaattttgatagcaaacgc
tgcgaaggctaccgcaacttctgcaacaaactctggaacgccagccgcttcgtgctgatg
aactgcgaaggccaggactgcggtctgaacgaccacaccccgaccgaatgcgccaccgca
gcgtatttggacttcagccaggcggatcgctggatcgtttcgctgctgcaaaaggccgag
gctgaggtgacccaaggctttgccgactaccgcctggacaacgtggccagcacgatttac
gactttgtctggaacgagttctgcgactggtacctggaaatcgccaaggtgcaaatccag
actggtgatgatgcccagaaacgtgctacccgccgcaccttgatccgcacgctggaaacc
attctgcgcctggcccatccgatcatcccgtttgtcaccgaagagctgtggcaaaaggtc
gcacccgtggccggacgcgctggtgcatccatcgccatcgctgcctacccggtgagtcag
cccgaacgcattgatgaggcagcgattgcccatgtcgccaaactgaaaaccctggtcgat
gcttgtcgtaacctgcgcggtgaaatgcaggtgtcacccgcccagcgcctgccgctgttt
gtcatggcctcagccgctgagtctgccttcatgaagaacgccgccccggtgttacaagcc
ctggccaaactgagtgaggtgtgtgtgtttgatgacgaggccacctgggccgccgccgcg
caagctgccccggtagcggtggtgggtgaagcccgtatctgcctgttcatggaaattgat
gtggccgctgaaaagctgcgtttgggcaaggaactggcgcgcctagaaggtgaaatcggc
aaggccaacggcaaactgggtaacgaatccttcgtggcccgcgccccggctgcggtgatt
gatcaggagcgcaaacgcctggcggactttgaggctacgctggccaaggtcaaagaccag
ttgactcggctgggataa
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