Rhodoferax lithotrophicus: MIZ03_0901
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Entry
MIZ03_0901 CDS
T10289
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00061
Fatty acid biosynthesis
rlh00071
Fatty acid degradation
rlh01100
Metabolic pathways
rlh01212
Fatty acid metabolism
rlh02024
Quorum sensing
rlh04146
Peroxisome
Module
rlh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MIZ03_0901
00071 Fatty acid degradation
MIZ03_0901
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MIZ03_0901
09145 Cellular community - prokaryotes
02024 Quorum sensing
MIZ03_0901
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rlh01004
]
MIZ03_0901
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rlh04147
]
MIZ03_0901
Enzymes [BR:
rlh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MIZ03_0901
Lipid biosynthesis proteins [BR:
rlh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MIZ03_0901
Exosome [BR:
rlh04147
]
Exosomal proteins
Exosomal proteins of breast milk
MIZ03_0901
Exosomal proteins of breast cancer cells
MIZ03_0901
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BCO26021
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All DBs
Position
904595..906145
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AA seq
516 aa
AA seq
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MSLVDLLIRQARQQPECAAVFSGTALHATYGQWAARSAGLAQGMRQAGLLPGDRVLLFMH
NHPRYLEVLWAAWWAGLVVVPVNAKLHTREVEWIIDNAQARWAFVTRDVAPEPLAGLERQ
IDIESAEADILLAPMLDAFAVPVTPRELGDLAWLFYTSGTTGRPKGVMLTHRNLITMGLT
YFVDVDPVANTDTIVYGAPMSHGAGLYAIPHVMAGARHVVPASGGVDPAELFALGQALGP
LSTFAAPTIVKRLVDHAQDHGISVEDSAKSFKTIVYGGAPMYLADIQRALRVMGPCFVQI
YGQGETPMVATALSRQQLADTLHPRYLERMASVGVAQTPVQVRVSNEQGQDVALGEVGEV
LVKGDCVMAGYWRNPEASALAIRDGWLWTGDVGCLDGDGFLTLKDRSKDLIISGGSNIYP
REVEEALLTLSGVDEVAVVGVPDPEWGEAVVAFVVLQAGTAVGQTELDEHCLAQIARFKR
PKHYHLVDRLPKNNYGKVLKTDLREVASSALKLHKV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgttgatttgctgatccgtcaggcccgccagcagcctgagtgtgccgcagtg
ttcagcggtacagcgttgcacgcaacctatggccagtgggcggcccgcagtgccggtttg
gcgcaggggatgcggcaagctggtttgctgcccggtgaccgggtgttgctgttcatgcac
aaccatccgcgttatcttgaagtgttgtgggccgcctggtgggccggtctggtggtggtg
ccggtgaatgccaagttacacacacgggaggtcgaatggatcattgacaacgcacaagcc
cgctgggcctttgtcacccgtgatgtggctcccgaaccattggcgggtctggagcggcag
attgacattgaaagtgccgaggccgatatattgttggcccccatgctggatgcttttgcg
gtcccggtgacaccccgtgaacttggcgacttggcctggctgttttacaccagtggcacc
accggcaggcccaagggtgtgatgctgacgcaccgaaacctgatcaccatgggattgact
tattttgtcgatgtggacccggtggccaacacggacaccattgtctatggtgcccccatg
tcgcatggcgctggcctgtacgccataccccatgtcatggcgggcgcgcgtcatgtggtg
cctgcgtctggcggggtggacccggcggagctgtttgcgctggggcaagctcttgggcca
ctgtccacctttgcagcaccaaccatcgttaaacgcttggtggatcatgcgcaagatcat
ggcatcagcgtcgaggattcggccaaatctttcaaaaccattgtttacggtggtgcgccc
atgtacctggccgacattcaacgtgccttgcgggtgatggggccatgttttgtgcagatt
tatgggcagggtgaaacacccatggtggcaacggctctgtcacgccagcaattggcagat
acccttcatccacgttatctggagcgtatggcctcggtgggggtggcacaaacaccggtg
caggtgcgggtgagtaatgagcagggtcaggatgttgcgctgggtgaggtgggtgaagtg
ctggtcaagggcgactgtgtgatggctggctattggcgcaatccagaagccagcgcactg
gccatccgggatggctggctgtggacgggggatgtggggtgtctggatggagatggcttt
ttgacgctgaaagaccgcagcaaggatctgatcatcagtggcggctccaacatctaccca
cgtgaagtcgaagaggcgctattgacattgagtggtgtggatgaagtggctgttgttggt
gtgccagaccccgagtggggtgaagcggttgtggcgtttgttgtgttgcaggcgggcacc
gcggtaggtcagaccgaactggacgagcattgcctggctcagatcgcgcgcttcaaacgt
cccaaacattaccatttggtggatcgtctgcctaaaaacaactatggcaaagtgctgaaa
acagacctgcgcgaagtggccagttcggcattgaagctccataaggtgtga
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