Rhodoferax lithotrophicus: MIZ03_0927
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Entry
MIZ03_0927 CDS
T10289
Name
(GenBank) ribulose bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00630
Glyoxylate and dicarboxylate metabolism
rlh00710
Carbon fixation by Calvin cycle
rlh01100
Metabolic pathways
rlh01110
Biosynthesis of secondary metabolites
rlh01120
Microbial metabolism in diverse environments
rlh01200
Carbon metabolism
Module
rlh_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MIZ03_0927
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
MIZ03_0927
Enzymes [BR:
rlh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
MIZ03_0927
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
BCO26047
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Position
complement(933751..935130)
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AA seq
459 aa
AA seq
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MDQSNRYADLSLKEEDLMAGGAHILVAYKMAPKSGLGYLEAAAHFAAESSTGTNVEVSTT
DDFTRGVDALVYYIDEASEDMRIAYPLELFDRNVIDGRFMLVSFLTLAIGNNQGMGDIKH
AKMIDFYMPERVIQMFDGPAKDISDLWRILGRPVKDGGYIAGTIIKPKLGLRPEPFAQAA
YQFWLGGDFIKNDEPQGNQVFAPIKKTIPLVYDAMKRAQDETGQAKLFSMNITADDHYEM
CARADFALETFGPDADKLAFLVDGYVGGPGMITTARRQYPNQYLHYHRAGHGAVTSPSSK
RGYTAFVLAKMSRLQGASGIHVGTMGYGKMEGEGDDRIIAYMIERDECQGPVYFQKWYGI
KPTTPIISGGMNALRLPGFFKNLGHGNVINTAGGGAYGHIDSPAAGAISLRQSYECWKAG
ADPIEFAKEHKEFARAFESFPKDADTLFPGWREKLGSHR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcgaaccgctacgctgacctgagcctcaaagaagaagacctgatggccggg
ggggcgcacattctggtggcctacaaaatggcgcccaaatccggcctgggctacctggaa
gccgccgcccactttgccgccgagtcctccaccggcaccaacgtcgaagtctccaccacc
gacgacttcacccggggtgtcgacgcgctggtgtactacatcgacgaagcctcggaagac
atgcgtattgcctacccgctggagctgtttgaccgcaatgtgatcgatggccgcttcatg
ctggtgtcctttctgacgctggccatcggcaacaaccagggcatgggcgacatcaaacac
gccaagatgatcgacttttacatgcctgagcgcgtcattcagatgtttgacggcccggcc
aaagacatctctgacctgtggcgcattctgggccgcccggtgaaagacggcggctacatt
gccggcaccatcatcaaacccaaactgggcctgcgccccgagccctttgcccaggcagcc
taccaattctggctgggcggtgacttcatcaagaatgacgagccacaaggcaaccaggtg
ttcgccccgatcaagaagaccatccccctggtctatgacgcaatgaaacgcgcccaggac
gaaaccggccaggccaagctgttctcgatgaacatcacggccgatgatcactatgaaatg
tgtgcccgagctgactttgcgctggaaacctttggccccgatgccgacaagctggctttt
ttggttgacggctacgtgggcggccccggcatgatcaccacggcacgccgtcaatacccc
aaccaatatctgcactaccaccgtgccggccacggtgcggtgaccagccccagttccaaa
cggggttacacggcctttgtgctggccaagatgagccgcctgcaaggtgccagcggcatc
catgtgggcacgatgggttacggcaagatggaaggcgaaggcgacgaccgcatcatcgct
tacatgattgagcgtgacgagtgccaaggcccggtttatttccagaaatggtatggcatt
aaacccaccaccccgatcatctcgggcggcatgaacgccctgcgcctgccgggcttcttc
aagaacctgggccacggcaacgtgatcaacacggccggtggcggcgcttacggccacatc
gacagccccgctgccggtgcaatttcgctgcgccaatcgtatgagtgctggaaagccggt
gccgaccccatcgagtttgccaaagagcacaaggaatttgcccgtgcctttgagtcgttc
ccgaaagatgccgacacgctgtttccgggctggcgcgagaagcttggctcgcatagataa
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