Rhodoferax lithotrophicus: MIZ03_1035
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Entry
MIZ03_1035 CDS
T10289
Name
(GenBank) HTH-type transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
rlh Rhodoferax lithotrophicus
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rlh03000
]
MIZ03_1035
Transcription factors [BR:
rlh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
MIZ03_1035
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13_2
TetR_C_13
DUF6262
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
BCO26155
UniProt:
A0ABM7MIR7
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All DBs
Position
1038936..1039538
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AA seq
200 aa
AA seq
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MRKTPNIRTTAKEASHERIVSAAAKAIRRSGYDGTGVADIMKEAGLTHGAFYAHFASREA
MLAEAADRAGAESNALAASVIAAVPPEQSLQALMQLYLSKEHLESIETGCPVSALGSEMP
RQSPEVRRAATLRIKEMIDLVARQFPDWGQPGAHERALVTVATMVGTLMLARAVDDAALS
DALCSASLKSLSLPKTESID
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaacacccaacatccgaaccacagccaaagaggcctctcacgagcgcatcgtg
agtgcggctgccaaagccatccgccgtagcggctatgacggcacgggtgttgccgacatc
atgaaagaagcgggtctgacgcatggcgctttctacgcccactttgcatcccgcgaagcc
atgttggctgaggctgcagaccgtgccggtgccgaatccaatgcgctggcggcaagtgtc
attgccgccgtgccaccagagcagtccttacaggcgctcatgcagctctatctctcgaaa
gagcatcttgagagcatcgagaccggttgcccggtttcggcacttggctctgaaatgcca
cgccagtcgcctgaggtgcgtcgtgcagccacgttgcgcatcaaggaaatgattgatctg
gtggcccgccagtttcctgactgggggcagcccggcgcacatgagcgtgcactggtgacg
gtggctacgatggttggcacattgatgctggcccgcgctgtcgatgatgccgcgttgtct
gatgcgctgtgcagcgcaagcttgaaaagcctcagcttgccgaaaaccgaatccatcgat
tga
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