Rhodoferax lithotrophicus: MIZ03_1753
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Entry
MIZ03_1753 CDS
T10289
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh03030
DNA replication
rlh03430
Mismatch repair
rlh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MIZ03_1753
03430 Mismatch repair
MIZ03_1753
03440 Homologous recombination
MIZ03_1753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlh03032
]
MIZ03_1753
03400 DNA repair and recombination proteins [BR:
rlh03400
]
MIZ03_1753
Enzymes [BR:
rlh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MIZ03_1753
DNA replication proteins [BR:
rlh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MIZ03_1753
DNA repair and recombination proteins [BR:
rlh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MIZ03_1753
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BCO26867
UniProt:
A0ABN6D4L2
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All DBs
Position
1781898..1782611
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AA seq
237 aa
AA seq
DB search
MRQIFLDTETTGLSADNGDRIIEIGCVEMLHRKLTGNNRHIYVNPGRDSHEEALKVHGIT
TEFLKDKPKFSEIAEDLMDYLKGAHVVIHNAPFDLGFLNMELALLGQPPVMSVVASITDT
LVMAKELYPGKRNSLDALCDRLEVDNSGRTLHGALLDAELLADVYINLTRGQETLQMDDA
SALDASGNKPAAMDLSGFVLPVIQASEQELEGHEVVLVQIDKESKGKTVWRTLSAVQ
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaaatatttctcgacaccgaaaccaccggtctgtctgccgacaacggtgaccgc
atcattgaaattggttgcgtggagatgctgcaccgcaagctcactggcaacaatcgccac
atttatgtgaaccctgggcgtgacagccatgaagaagcactcaaggtgcacggcatcacc
actgagtttttgaaagacaagcccaagttttcggaaattgccgaagacctgatggactat
ctgaaaggtgcgcatgtggtgatccacaacgcgccgtttgatctgggttttttgaacatg
gagctggccctgctggggcagccaccagtgatgagtgtggtggccagcatcaccgacacc
ctggtcatggccaaagagctgtaccccggcaagcgcaattcactcgatgccttgtgtgac
cggctggaagtggacaattcgggccgtaccttgcacggtgcgttgctggatgccgagctg
ctggctgatgtctacatcaacctcacccgtgggcaggaaaccctgcagatggacgatgcc
tcggcgctggatgccagtggcaataaaccggccgccatggatttgagtggctttgtattg
ccggtgattcaagccagcgaacaagagcttgagggtcatgaagtggtgctggtgcagatt
gacaaagaaagcaagggcaaaacggtctggcgcacgctcagtgcagtccaataa
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