Rhodoferax lithotrophicus: MIZ03_1809
Help
Entry
MIZ03_1809 CDS
T10289
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
rlh Rhodoferax lithotrophicus
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rlh02044
]
MIZ03_1809
02035 Bacterial motility proteins [BR:
rlh02035
]
MIZ03_1809
Secretion system [BR:
rlh02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
MIZ03_1809
Bacterial motility proteins [BR:
rlh02035
]
Pilus system
Pilus assembly proteins
MIZ03_1809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Gp18_dom_I
Motif
Other DBs
NCBI-ProteinID:
BCO26923
LinkDB
All DBs
Position
1839398..1843204
Genome browser
AA seq
1268 aa
AA seq
DB search
MNKFILRCLWVLLMACLSTLSAFGQMAQTPLLTQSSAAEPNLVFVFDNSGSMAWDYMFQY
SEPSCASSSGSVGKACQSPDVNMMTYDPRILYKLRVNADGTDKDPGVASNVSSFNVYFYQ
PTVPANYKVGSITVKSGGKNYKVGDVVTFKAPTSVGGVTALGVVSSVSGSGAITGVSITT
AGSGYTKATSVSKVTTAKGTKASFNTPTMISIAATAVNQMWDGTGSVDSLSYFSPYTPDS
GSPLAVGAKSGVTYPNTADSSTTEYPAFEKRTDCNGVFTTAGGSTQKYCTWANEQQNYAN
WKLYHSKRVELARTGIGLAFKPLTSTFRLGWGTISKLGGNSPALTAGVSLFTTSRKQAFY
DWLYGSGTSGSGNTPSRTSMDKVGQYFSRSDSDGPWGSMPSYTSTSTSTSTSGGTEAIAN
FASCRRSNMLLMSDGYWNSTDPTVGNVDGTDGPVITSATGSTYQYKAAYPYKDVTSNTLA
DVAMKYWVNDLQPNMQNNVAAISGINESFWQNVSFYGIGLGVYGTLEQTTATLANLATGD
TLWPVAKADSAEAIDDMWHAAVNSRGQFLSARDSDTLTTAVERMMTSINKLSSSQSGVAV
STANLVDGTRKYTPQYTTGSWVGNVTSRNLNPLNGNEVSTAWQVESTDPLTGDALSQIPG
HASRNIVVGNGSATAPKAVNFTYSAMYAAGLTGLMTGTVNNDLINYLRGDATNEGDFGLY
RTREARLGDIVNSSPMLVKRGVDLKYDQSGSTVTGADSYRSFVTDNASNTEGVLFVGAND
GMLHAFRDGTPTKPDDGGIEVFAYVPKAVLPTISLLADKAYSHRYYVDGPMVESATYNGS
AWKNVLLGTTGAGAKSVFALDVTDPLAMDASSVLWEVSSASTGFAELGHVLTDVQAGPLP
SGDWVAIFGNGQMSASGSARLFVVNLNTGALLKELIAEAGPSNGLGGVRVVRNKYQQIIG
AYAGDLKGNLWKFDLSGASSSDWVVGLSGSPLLAVGSTKPITAAPAVLKKPPVDANHPEL
QEYVVVAGTGKFFETTDLSTTSQQTLYGVWDSQPFGSAVAATGIPQTDTTHLVQQTISTA
QTLSRTVVNSDLTTSTVDVTYFSVSRNVVSWSATTRGWFINLPNSGERVVYPLEALLDRF
VAVDAISPSNVSTNLCAQSGQGTGYVYLIDGLTGAGPGEQVLDTNGDGQVNTNDAMVSGF
TAKADGRNTWLKVNASSNDNQTVFTGITGSDGTGNMVKLSCAAIGNCKPVATPSMTIKSR
EWRQLFMR
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaattcattcttcgttgtctatgggtcttgctgatggcctgtttgtcaacttta
tctgcctttgggcaaatggcgcaaacccctttgttgacgcagagttcggctgcagaaccc
aacttggtgtttgtgtttgacaattctggttcgatggcgtgggactatatgtttcagtat
tcagagccatcgtgtgcatccagcagcggttctgtagggaaggcttgccagtcacccgat
gtcaacatgatgacttatgacccgcgcattctttacaaactgcgtgtgaatgcagatggc
acggacaaagatccaggtgtggcaagtaatgtcagttcattcaatgtatatttttatcag
cccacggttccagccaattacaaagtgggcagtatcaccgttaaaagcggcggcaagaac
tacaaggtgggagatgtggtcacgtttaaagctccaacttctgtgggtggtgtaactgcc
ttgggtgtagtcagcagcgtgagtggcagtggtgccatcacgggtgtcagcataaccacg
gcgggttctggttataccaaggccacatcagtcagcaaagtgaccactgcaaaaggcaca
aaagcctcatttaatacacccacaatgatttccatagcggcaactgccgtgaatcaaatg
tgggatggaactggtagcgtcgattcactgagctatttttcgccttacacacctgattca
ggcagccccttggctgtaggtgccaagtctggcgtgacttaccccaacacggcagacagt
tcgacgaccgaatacccggcgtttgaaaaacgcacggattgcaacggtgtgttcactacg
gcaggtggttccacacaaaagtattgcacctgggccaatgagcagcaaaattatgccaac
tggaagctttaccattccaaacgcgtggagttggcccgtaccggaatcggtttggcattt
aaaccattgacatctacgttccgtttgggttggggcacgatttcaaaactgggcggaaat
agccctgctttgactgcgggtgtcagcttgtttaccacttcgcgcaagcaggctttttat
gattggttgtatggttcaggcaccagtggcagtggtaatacacctagtcgcacatctatg
gacaaggtaggccagtacttcagtcgctcagacagtgatgggccctggggctccatgcca
agttatacgtcaaccagtaccagtacaagcaccagtgggggcactgaagccattgccaat
tttgcgagctgcagacgctccaacatgctgctcatgagtgatggttattggaacagtacc
gatccaactgtcggtaatgtggacggcaccgatggtcccgtaattaccagtgcgaccggt
tccacttaccagtacaaagcggcttacccgtataaggacgtgacgtcaaatacgttggct
gatgtggccatgaaatattgggtgaacgatttacaacctaatatgcaaaacaatgtggca
gccatcagtggcattaatgaatctttttggcagaacgtatctttttacggtattggtttg
ggtgtttatggcacgttggaacaaacaactgcaaccttggccaaccttgcgacgggggac
actttatggccggtagccaaagccgatagtgcggaggcgattgacgacatgtggcatgct
gcagttaattcacgcggacagtttttgagtgcacgcgattctgataccttgaccactgca
gttgaaagaatgatgacaagcatcaacaagctcagttcttcgcagtcaggtgtggctgtg
tctaccgccaatctggtggatggcacacgcaaatacacaccgcaatacaccaccggctca
tgggttggcaatgttacatcacgcaacctgaatcccttgaatggcaatgaggtgagtacc
gcttggcaagtagagagtacggatcctttgacaggtgatgcactgtcgcaaatacccggc
catgcatctcgaaatattgtggtcggtaatggttcggccaccgcacccaaagcagtcaac
tttacctacagcgccatgtatgcagccggtttaactggactgatgacgggcacggtgaat
aacgatttgattaattatttgcgtggtgatgcaacgaatgaaggtgattttggtttgtac
agaacgcgcgaggccaggttgggagatatcgttaactccagccccatgttggtcaagcgt
ggtgttgatctgaaatacgatcaaagtggatcaaccgttaccggggcagacagttaccgc
agcttcgtcacggacaacgcctccaatacagagggggtattgtttgtaggtgccaacgat
ggaatgttgcatgcatttcgtgacggtacacctaccaaacccgatgatggtggtatagaa
gtgtttgcatatgtgcccaaagcggtcttgcctacgatcagcttgttggcagacaaggct
tattcacaccgctattacgtggatggtccaatggttgaatcagcgacttataacggtagc
gcttggaaaaatgtgttgttagggacaacaggtgcaggtgccaagtcagtttttgccttg
gatgtgactgatccgttggccatggatgccagcagtgtattgtgggaggtgagctcagca
agcactggcttcgctgaattggggcatgttttgacggacgtacaagctgggccattgcct
agtggtgattgggtggcaatttttggcaatggtcagatgagcgcctctggttctgctcgg
ctttttgtggtcaatctcaatacgggcgcattattgaaggaactgattgcggaagcaggc
ccgagcaatggtttgggtggggtgcgtgtggttcggaacaagtatcagcaaatcattgga
gcctatgccggggatctaaagggtaacttgtggaaatttgatcttagcggtgcatcttcg
tcagattgggttgttggcttgtctggcagtcctttgctggctgttggcagcacaaagcca
atcaccgcagcacctgctgtcctgaaaaaaccacctgtggatgccaatcacccagaactg
caggagtatgtggttgttgcaggaacaggcaagttttttgaaactaccgatctttcaacc
acctcacaacaaacgttgtatggggtgtgggatagccaaccgtttggcagtgcagtcgct
gcgacaggtattcctcaaacagatacgacccatttggttcagcaaacgatttcgactgca
caaacattaagtcgaacggttgtgaacagtgatctcaccacctcgacggtggatgtgaca
tatttttcagtttctcgtaatgtggtcagttggagcgccacaacaagagggtggttcatt
aatttacccaacagtggtgagcgggtggtgtatccattggaagccctattggatcgtttt
gtggctgtagatgccatctcacccagcaatgtgtctactaatttgtgcgcgcaaagtggg
caaggtactgggtatgtctatttgattgatggtttgacaggagcagggcctggtgagcaa
gtgctggatactaatggggacggtcaagttaataccaatgatgctatggttagcggattt
acggcaaaggccgatggccgtaatacttggttgaaagtgaatgcgagcagtaacgataac
caaacagtctttactggtattactggaagtgatggtactggaaatatggtcaaactaagc
tgtgctgcgataggaaactgcaagcctgtagcgacgccaagcatgaccatcaaatcgcgt
gaatggcgacagctgtttatgcgctaa
DBGET
integrated database retrieval system
