Rhodoferax lithotrophicus: MIZ03_1883
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Entry
MIZ03_1883 CDS
T10289
Name
(GenBank) HTH-type transcriptional activator RhaS
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
rlh Rhodoferax lithotrophicus
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rlh03000
]
MIZ03_1883
Transcription factors [BR:
rlh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MIZ03_1883
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding_2
HTH_23
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BCO26996
UniProt:
A0ABM7ML53
LinkDB
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Position
complement(1922305..1923297)
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AA seq
330 aa
AA seq
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MAPASSCHATSMAFDAPFVGNTHQIRTVEAFDADEHAHNLTDWEQSYDQITRGRFHGTLA
ELQLPQMQVFRECTSQAVRQSCCVWPDAFWFGLPEQSDQTRINGRLAGAHAIMVRPGDCE
FELVTPPDYAIYGIVIRRNALLQAAELSGSRIDWAQLACAEVIHVDNNSRTSLLQTLAGL
LQNDGGCTDPDLRQQVLLNTLLALLDTSAVDGAVSSSFQRRQRIVAKARDLVLAHHDQAI
TVPKLCEQLFVSRRTLQYCFEDVLGMSPMQYLRLIRLNGARRHLRQASAKSLTVQDVAAD
WGFWHFSQFSSDYRKLFGQSPSQSMLTKTH
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagcctcttcttgccacgccacatctatggcctttgatgcgccatttgtgggc
aacacgcaccagattcgcacggtcgaagcctttgatgccgacgagcatgcccacaacctc
accgattgggaacaaagttacgaccagatcacacgcgggcgttttcacggcacgctggcg
gagctgcaactgccccagatgcaggtgtttcgcgaatgcaccagccaggcggtgcgccag
tcatgttgcgtctggccggatgccttctggtttggcctgcccgagcagtctgaccagacc
cgcatcaacgggcggctggcgggcgcgcacgccatcatggtgcgcccgggtgactgcgag
tttgagctggtaaccccgccggactacgccatctatggcatcgtgatccgccggaacgcc
ttgttgcaagctgcagaactgagcggcagccggatcgactgggcacaactggcctgtgcc
gaggtcatacacgtggacaacaactcacgcacgtccttgctacagacgctggccggcttg
ctgcaaaacgacggtggctgcaccgaccctgatttgcgccagcaggtcctgctcaatacc
ctgctcgccctgctggataccagtgcggtggacggcgcggtcagcagcagctttcagcgc
cgccagcgcatcgtggccaaagcgcgtgatctggtgttggcacaccatgaccaggctatc
accgtgcccaagttgtgtgaacagctgtttgtcagccgtcgcaccttgcaatattgtttt
gaggacgtgctgggcatgagccccatgcagtacctgcggctgatccgcctcaatggtgcg
cgccgccatttgcgacaagcctcagccaagtccctgacggtgcaggacgtagccgccgat
tggggtttctggcatttcagtcagttctccagcgactaccgcaagctgtttggacaaagc
ccgtcgcagtccatgctgacgaaaactcattga
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