Rhodoferax lithotrophicus: MIZ03_1977
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Entry
MIZ03_1977 CDS
T10289
Name
(GenBank) inner membrane ABC transporter permease protein YdcU
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
rlh
Rhodoferax lithotrophicus
Pathway
rlh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MIZ03_1977
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rlh02000
]
MIZ03_1977
Transporters [BR:
rlh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
MIZ03_1977
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
BCO27090
UniProt:
A0ABM7ML93
LinkDB
All DBs
Position
2008519..2009442
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AA seq
307 aa
AA seq
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MPEASTLSRRLSDLLYQRRSLTLLLMLTPPLLWFGVVYVGSLLTLLGQSVFTFDDMAMSV
VAELTTDNFRNLMVPANLDIVMRTLTMAIAVTLGTVLIGFPMAYYMAHHATPTEKGVFFV
GVMLPMWASYIVKAYAWTVLLAKGGVMYWALEHLGLMGALEAVLRIPGIGGETLATSNLG
RFLVFTYIWLPFMILPIQAAIERVPANLLLASADLGAHPFQTFRTVLWPLAFPGVVAGSI
FTFSLTLGDYIIPQLIGPSGLYIGSMVYTLQGTIGNMPMAAAFTCVPIVLITVYLALARR
LGAFNAL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggcctccaccctgagccgacggctctccgacttgctgtaccagcgccgctcc
ctgacgctgctgctgatgctcaccccaccgttgttgtggtttggtgtggtgtatgtaggc
tctttgctcactttgctgggccaaagtgtttttacctttgacgacatggcgatgtcggtg
gtggctgagctgaccactgacaacttccgtaacctgatggtgcccgccaatctggacatt
gtgatgcgaaccctgaccatggcgatagccgtcacgctaggcacggtgctgattggtttt
ccgatggcgtactacatggcgcaccacgccacacccactgaaaaaggtgtcttttttgtg
ggcgtgatgctgcccatgtgggccagctacatcgtcaaagcctatgcctggacagtgttg
ctggccaaaggcggtgtcatgtattgggcgctggagcacctggggttgatgggcgcgctg
gaggcggtgttgcgtattcctggcatcggtggtgaaaccttggccacttccaacctcggg
cgctttctggtcttcacctacatctggctgccgttcatgattttgccgatccaggccgcc
attgaacgtgtgccggccaatttgctgctggcctcggctgatttgggtgcgcacccgttc
cagacctttcgcaccgtgttgtggccgctggctttccccggtgtggtggcggggtcgatc
ttcaccttttcgctcaccctgggcgactacatcattccccagttgattgggccctcgggt
ttgtacatcggcagcatggtctacaccctgcaaggcaccataggcaacatgcccatggct
gcggcttttacctgtgtgcctattgtgttgatcacggtgtacctggctttggcgcgacgt
ttgggagcttttaatgcgctctaa
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