Rhodoferax lithotrophicus: MIZ03_2057
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Entry
MIZ03_2057 CDS
T10289
Name
(GenBank) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MIZ03_2057
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rlh01007
]
MIZ03_2057
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlh03016
]
MIZ03_2057
Enzymes [BR:
rlh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
MIZ03_2057
Amino acid related enzymes [BR:
rlh01007
]
Aminoacyl-tRNA synthetase
Class II (U)
MIZ03_2057
Transfer RNA biogenesis [BR:
rlh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
MIZ03_2057
Prokaryotic type
MIZ03_2057
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B3_4
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
BCO27170
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Position
2091563..2093998
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AA seq
811 aa
AA seq
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MQFPESWLREFCNPPLSTAELSETLTMAGLEVEELKPVAPPFSHIVVGEIKEAVQHPNAD
RLRVCQVDVGQAELLTIVCGAPNARVGIKVPCALVGAELPPGEDGKPFLIKVGKLRGVES
FGMLCSARELKLSEVHGGLMELASNASVGQNIREHLQLDDTLLTLKLTPNLAHCLSVYGV
AREVAALTGAPLKPLTFPKAACALDDVLPVKVSAPDLCGRFSGRVIRGVNPKATTPAWMV
DKLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLNVRWGKPGEQLKLLNGNTV
IVDTQVGVIADDVQVESLAGIMGGDATAVSDDTTNIYVEAAYWWPKAIAGRSRRFNFSTD
AGHRFERGVDPELTVEHIERITQLILEICGTPDTVCGPLDDQKVAMPPVCKVSMRVARAA
KVLGMPLTQEQCVKALTGLGLPVVEGAGVVEVTAPSYRFDLQIEEDLIEEVARMIGFHHL
PQTPPSAPITAKIRPENQRSGFAVRRTLAGLGYQETINFSFVEERWENELAGNPNPIKLL
NPIASQMSVMRSSLLGSLLQVLKFNQDRKAQRVRVFELGRVFLRDASIISTDTTVQGFDQ
PMKVAGLTVGSVDTPAWGCKERAVDFFDVKGDLETLVAPSRLTFEPAQHPAMHPGRCAQV
VCAGKVVGFVGELHPKWRQTYDLTQAPVLFEMDLDAVLNRQVPQFTSVPRFQSIERDIAV
MVNEAVTHDALMKAIWSAETSGVLRDALLFDIYRPQAMDISGKQTVFTEKSMAVRLSLNS
ENTALTEQQIEATVAAVVLSLAEKVGARQRI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcctgaatcctggttgcgtgaattttgcaacccacctttgagcactgctgaa
ctctctgaaaccttgacgatggcaggtttggaagtggaagaactcaaacccgtagcaccg
ccgttcagccacatcgttgtgggtgaaatcaaagaagccgtgcaacaccccaatgccgac
cgcctgcgcgtgtgtcaggtggatgtgggtcaggccgagttgctgactattgtgtgtggt
gcacccaatgcccgcgtggggatcaaagtgccttgtgccttggttggtgcagagttgcca
cctggagaggacggtaaaccgtttttgatcaaggttggcaagcttcgtggcgtggagagt
tttggcatgttgtgttcggcacgcgaactcaagctctcagaagtgcatggtggcttgatg
gagctggcctctaacgcctcagtggggcaaaatattcgcgagcatttgcagttggatgac
accctgctgacactcaagctcacacccaatctggcacattgcctgagtgtctatggtgtg
gcgcgtgaagtggccgccttgaccggtgcacccctgaagccgctgacttttcccaaggcc
gcttgtgcgctggatgacgtgttgccggtgaaagtgagtgcacctgatttgtgcggacgt
ttttccgggcgagtgattcggggtgtgaatcccaaggccaccacgccagcctggatggtc
gacaaattggcccgttgcggtcaacgcagtgtgacggcgttggttgatatttctaactat
gtgatgtttgagttgggtcgccccagtcatatttttgatctggacaagattcatggtggt
ctgaatgtgcgttggggcaagccgggtgaacagctcaagttgctcaacggcaatacggtg
atagtggatacccaggtaggcgtgattgcagacgatgtgcaggttgaatccttggcgggc
atcatgggtggtgatgcgacagcagtgtcagacgacaccaccaacatttatgttgaagcc
gcgtattggtggcccaaagccattgctgggcgttcgcgccgctttaatttctccaccgat
gcaggacaccggtttgaacgaggggtggatcctgagttgacggtagagcacattgaacgc
attacccaattgattctggagatttgcgggacgcctgacactgtttgtggtcctttggat
gaccaaaaagttgctatgccgccagtctgcaaagtgagtatgcgcgtggcacgtgcggcc
aaagtacttggtatgcctttaacccaggagcagtgtgtgaaagcactcaccgggctgggc
ttgccggttgtagagggggcgggtgtggtggaggtgacggcaccgtcctaccgcttcgac
ttgcaaattgaagaggatttgattgaagaagtggcccggatgatcggttttcaccatttg
ccgcaaacaccacccagtgcaccaatcactgccaagatccgccctgaaaatcagcgttcc
ggttttgctgtgcggcgtacattggcaggtttgggttaccaggaaaccatcaactttagt
tttgtcgaagaacgctgggagaatgagctcgcgggcaacccgaatccaatcaagttgctc
aatccgattgccagccaaatgagcgtgatgcgctcgtcattgcttggttctttgctacaa
gttttaaaatttaatcaggatcgtaaagcacagcgagtaagggtttttgaattgggtcgg
gtgtttttgcgtgatgcatccattatcagcaccgacactaccgtgcaaggttttgatcaa
cccatgaaggtggctgggctgacggttggctccgtggataccccagcgtggggatgcaaa
gagcgtgccgttgacttctttgatgtcaagggtgatttggaaactttggtggccccaagc
cggttaacgtttgagccagctcaacatccggccatgcacccaggtcgttgtgctcaagtc
gtgtgtgctggcaaagttgttgggtttgtgggcgaattgcatcctaaatggcgacaaacc
tatgatttgacgcaagcgcctgtgttgtttgagatggatttagatgcggtgctgaaccgt
caagtgcctcaatttacgtctgtaccgcgtttccagtcgattgagcgcgatattgccgtg
atggttaatgaagccgtaacacatgatgccttgatgaaagccatttggtcagccgaaacg
tcaggtgtgttacgtgatgcattgctgtttgacatttatcggccccaagcaatggatatc
agtggtaaacaaacggtatttacagaaaaaagtatggctgtgagattaagcctcaattcg
gaaaataccgcgttgactgagcagcaaattgaggccacagtggctgctgttgtgctcagt
ctggctgaaaaagtaggtgcgcgtcagcgtatttga
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