Rhodoferax lithotrophicus: MIZ03_2139
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Entry
MIZ03_2139 CDS
T10289
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh03030
DNA replication
rlh03430
Mismatch repair
rlh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MIZ03_2139
03430 Mismatch repair
MIZ03_2139
03440 Homologous recombination
MIZ03_2139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlh03032
]
MIZ03_2139
03400 DNA repair and recombination proteins [BR:
rlh03400
]
MIZ03_2139
Enzymes [BR:
rlh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MIZ03_2139
DNA replication proteins [BR:
rlh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MIZ03_2139
DNA repair and recombination proteins [BR:
rlh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MIZ03_2139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Bclx_interact
Motif
Other DBs
NCBI-ProteinID:
BCO27251
UniProt:
A0ABM7MMA9
LinkDB
All DBs
Position
complement(2162150..2163580)
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AA seq
476 aa
AA seq
DB search
MLPCYVLLDLETTGGSAQQDRITEIAAVRVEQGVEVARWSTLVNPGTPISGFIEKLTGIN
DAMVAHAPRFAEVASQLTTLLDGAVLVAHNVRFDHGFLQHELARTGITLRAKTLCTVRLS
RLLYPQFKSHGLDAIMQRHGLSSTARHRAMGDVEVMQHWLQLACAELGTECVQRHAQTLL
QGSAALPPQLDTPVSDIPDTPGVYLFYGETSLPLYVGKSVKLRSRIMSHFQAAGRNPREM
RIAQDIRRIEWTETAGELGALLLEARLVKELQPLHNRQLRRENTLCAWRLEANPNSRPLL
TLVRGKDLAPQQFGALYGPYRSKNQALSHLRELADTHGLCLQALGLESGKGRCFGHQTGH
CKGVCCGEETPERHHLRLQMALAEHKLHVWPYTGKVGLREHNPRTQRTDIHLFEQWCHLA
TVHSDEELTDALQTRQSQALAFDLDTYRLAVKHLLPGKHTGLERLIFSCFTYEISL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttgccctgctatgtgttgctggatctggaaaccacgggcggcagtgcgcagcaagac
cgcatcaccgaaattgcggccgtgcgggtggaacaaggcgtggaggtcgcgcgctggagc
accctggtcaaccccgggacacccatttctggctttattgaaaagctcaccggcatcaac
gatgccatggtggcccatgcaccccgttttgccgaggtagccagccagctgacaacgctg
cttgatggcgcggtactggtggcccacaacgtacggtttgaccatggttttttacagcac
gaactggctcgtaccggcatcacgctacgggccaaaaccctgtgtaccgtgcgcctgtca
cgcctgctgtacccgcagttcaagagccatggtctggatgccatcatgcaacgccatggc
ctgagcagcaccgcccggcatcgcgccatgggtgatgtggaggtgatgcaacactggctt
caattggcctgcgccgagctgggtaccgagtgtgtgcaacgccatgcgcaaaccttgctg
caaggcagtgccgccctgccgccacaactggacacgcccgtatcggacattcccgacacg
cccggcgtgtacctcttttatggtgaaacctctctgccactgtatgtgggcaaaagtgtc
aaactgcgcagccggatcatgtcgcactttcaggcagccggacgcaacccacgtgagatg
cgtattgcacaagacattcgccgtatcgaatggactgaaacggcaggggaactgggtgca
ctgctgctggaggcacggctggtcaaggaattacaacccctgcacaaccgccagttacgc
cgtgaaaacaccttgtgtgcctggcggcttgaggccaacccgaacagccgcccgctgctc
accctggtgcggggcaaagacttggccccacagcagtttggcgcactctacggcccttac
cgctccaaaaatcaggcgctatcacatctgcgtgaattggccgacacccatggtttgtgc
ctgcaggcgctggggctggagtccggcaaaggccgctgttttggccaccagacaggtcac
tgcaaaggcgtgtgctgtggcgaagaaacacctgagcggcatcacctgcggctgcaaatg
gcattggcagagcacaaattacacgtctggccctataccggcaaagtaggcctgcgtgag
cacaatccgcgcacccagcgcaccgacattcacctgtttgagcagtggtgccatctggcc
accgtacattcggacgaagaactgacagatgccctgcaaacccgccaaagccaggccttg
gcgtttgacctggatacctatcgcctggcggtgaagcatttgctgcctggcaaacacacc
ggactggaacgccttattttttcctgttttacctatgaaataagcctctag
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