Rhodoferax lithotrophicus: MIZ03_2278
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Entry
MIZ03_2278 CDS
T10289
Name
(GenBank) sensor histidine kinase RcsC
Organism
rlh Rhodoferax lithotrophicus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_3
HATPase_c
PAS_9
HisKA
PAS
Hpt
PAS_4
PAS_8
HATPase_c_3
PDE8A_N
PAS_13
PqqF_C_3
Receiver_CRE1
Motif
Other DBs
NCBI-ProteinID:
BCO27390
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Position
2271665..2275249
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AA seq
1194 aa
AA seq
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MHKLLARQIRRLLGVEEDQLPAVLEELQQLARSSAVSERAAHLLAGVSAFLTRVEEAYAQ
NDRDLDLKTRSLQLSSVELSHTNDRLREELDSRTRAIDSLRETANSLLKTVDADMPVSQY
DSLESLSTLMSELVHQREISQHDLQAALSDLAKQKFALDQHAIVSMTDVTGRITYANDKF
CKISGYTRDELLGKDHRLINAKAHPQEFFSHLWRTILSGKVWHGEVCNRAKNGAVYWVQA
TIVPLMDERNLPEQFIAIRTDITARKQMQAAVALAESRVRRITNAVPGVVYQCEVGAGQV
RYTFVSERLEEIRGLGRAALLADGQLAYTQIVDEDRSRCFSEILAAGANRTAWQGDYRVR
MPDGSLRWIRSEINPDADLSAEGYTVFTGIWQDVTQLKEAGERLIEVSESIPVVVFQYRL
WADGRQNFPFCSRVAEQICGLSAQEIMNDAAVFFQQVHPVDQEAFEQAFVASAKSLVRIS
LDFRIFHKRTGKVIWVHGESMPKTAVDGGVIWNGYLADISREREASEELHRAKEAAEVAN
RAKSDFLANMSHEIRTPMNGVIGMTELALDTDLTDEQREYLEIVKSSSESLLRVINDILD
FSKIEAGKLMIETIPFNLNGVVSETLKTLAVRAHVKGIELVCDIDPDLPLAVIGDPGRLR
QILMNLIGNAIKFTEQGQVLLSVSFEQTAQKLPVFKFSVKDSGIGIPESKLHSIFEAFSQ
EDSSITRRFGGTGLGLSISARLVEALGGQISVKSDIGKGSQFDFSVVLKLDEENAVLSQT
SIRLVGLRVLLVDDNEVNRVVISRTLQSLGMLTTQADSGEQALVLLQQSLSAGQHFDFVL
LDAHMPVMDGFTTAGKILALPNGAAMSLVMLSSAGLKGDAQHSKEVGFSAYLSKPFTRDE
LAQVLNRVINRATDTPSDLITRHVIKESQTVLEVLLVEDHVINQKLAMALIGRWGHHVTV
ADNGQIALELLTQHRFDVVLMDMMMPVMDGLEATQRIRAGELDGQHVPIVAMTANAMLGD
RERCLQAGMDDYISKPIELAELQRVLTKFAPTKVKAASTNLCLPVSDDGSMADVNIKPFN
DFDYVKALAASDQEVVEIVQEVFLAQWPIDLTKMMEALRGGDYSSLLHTAHALKGTLGLF
GARPATQLASELEVMAGQAKTTSSSSTLEAMKLKLDHLKIQIEQLLAALRNHSI
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcataagttgcttgcgcgccaaatacggcgcttgctgggggttgaggaggatcagctt
cccgcggtgctggaggagttgcagcaattggccaggtcatcggcagtgtctgagagagcc
gcgcatttgcttgcgggggtgtcagcgttcctgacacgggtggaggaagcttatgcacaa
aatgatcgtgacctggatctgaaaacacgcagtttgcaactcagctcggtggagttgtca
cataccaatgatcgcttgcgagaagagctagacagtcgcacccgtgccatagactccttg
cgtgaaacggccaatagtctgctgaaaacggttgatgcagatatgcctgtgtcgcagtac
gacagtctggagtctttgtcgacacttatgtcggaactggttcatcagcgcgaaatcagc
cagcatgatctgcaggccgcgttgtctgatctggccaaacagaaatttgcattggatcag
cacgcgattgtgagtatgaccgatgtaactggccgcattacttatgcaaacgacaagttt
tgcaagatcagtggttatacgcgtgatgaactgctgggtaaggaccatcgcctgatcaat
gccaaggcacatccccaggagtttttcagtcacttgtggcgaactattttgtccggcaag
gtgtggcatggtgaagtttgcaaccgtgccaaaaatggtgccgtgtactgggtgcaggcc
accattgtgcctttgatggacgaacgcaatttgccagagcagttcatcgctattcgcacc
gacatcaccgcacgcaagcaaatgcaagcggctgtggctttggccgagagccgggtgcgg
cgcatcaccaacgccgtgccaggggttgtgtaccaatgcgaggttggagcgggtcaggtg
cggtatacctttgtgagtgagcgtctggaggagattcgtgggctgggtcgggcggctttg
ctggcggatggtcagttggcctatacacaaattgtggatgaagatcgcagccggtgtttt
tccgaaatcttggctgcgggtgcaaatcgcaccgcatggcaaggcgattaccgggtgcgt
atgcccgatggcagtctgcgctggattcgctctgaaatcaacccggatgcggatctgtct
gcagagggttatacggtgtttaccggcatctggcaggatgtgacgcagcttaaagaggct
ggtgagcggctgattgaggtcagtgagagtattcctgtggtggtttttcagtatcgtttg
tgggctgatgggcggcaaaactttccattctgtagccgggtggcagaacaaatatgtggt
ttgtctgcgcaagagatcatgaacgatgctgcggtgtttttccagcaagttcaccccgtt
gaccaagaggcgtttgaacaggcctttgtggcttcggccaagtcgttggtgcgaatttcg
ctggattttcgtatttttcacaaacgcactggtaaggtgatttgggtacatggcgaatcc
atgcctaaaacggcggtggatggtggggtgatctggaacggttatcttgccgacatttcg
cgtgaacgtgaggcctctgaagaactccaccgagccaaagaggcggcagaagtggccaat
cgggccaaatcggactttttagccaacatgagccatgaaatccgtacccccatgaacggt
gtgatcggcatgacggagctggcgctggacaccgatttgacggatgagcagcgtgaatac
cttgaaattgtcaagtcgtcgtcggagtcgttgctgcgtgttatcaacgacattcttgat
ttttcaaaaatcgaagccggcaaactgatgattgaaacaattccttttaatctcaatggc
gtggtgagtgagacactcaagacgttggccgtacgtgcgcatgtcaagggcattgaactg
gtatgcgatatcgacccggatttgccattggcggtgatcggggatcctgggcgtctgcgc
caaattttgatgaatctgattggcaatgccatcaaatttaccgaacaagggcaggtattg
ttgagtgtgtcgtttgagcaaactgcacaaaagttgcctgtgttcaaattttcagtgaaa
gactccggtattggtattcctgaatccaagttgcacagtatttttgaagcgttttcgcaa
gaagacagcagcattacacggcgttttgggggaactggtttgggcctatctatttcggcc
cgattggttgaagcgctggggggacaaatttcagtaaaaagcgatataggcaaaggcagt
cagtttgatttttcagtggtgttgaagctggatgaagaaaatgcggtgctatctcagaca
tccatcagattggttggcctgagggtgttgttggtggatgacaacgaagttaaccgagtg
gtgatctctcgcacattgcaaagtcttggcatgcttaccacccaagccgactctggtgag
caggcgttggttttgttgcaacagagcttgtctgcgggtcaacactttgattttgtactg
ttggatgcacacatgccggtcatggatggtttcaccacggctggaaagatactggctttg
cccaatggcgcggctatgtcactggtgatgctttcttcggctgggttgaagggggatgcg
cagcactccaaagaagtcggtttttcggcatacctgtcaaaaccttttacccgtgatgag
ttggcgcaggtgctgaaccgggtgataaatagggccacggatacaccgtcagatttgatc
acccgacacgtcatcaaggaatcacagacggtattggaggttttgctggtggaagaccac
gtgatcaatcagaaactggcgatggcgttaattgggcgatgggggcatcacgtgacagtg
gctgataacggtcaaattgcccttgagctgttgacccagcatcgatttgatgtggtcttg
atggacatgatgatgcccgtgatggatggtttggaggctacccaacgtattcgtgccggt
gaacttgatgggcaacatgtgccgattgtggccatgaccgctaatgccatgctgggagat
cgtgagcggtgtttacaggctggaatggatgattacatttcaaaacctattgagttggct
gaacttcagcgtgtgttaaccaaatttgcgccgacgaaggtgaaagcagcttccacaaat
ctgtgcttacccgtgtccgacgacggatcaatggcagatgtaaatatcaagccttttaac
gattttgactatgtcaaagcattggcggcatctgaccaagaagtagtggagattgtgcag
gaagtgttcttggcacaatggccgattgatttgacgaagatgatggaagcgctacgcgga
ggcgattattcgtcattactgcataccgcacatgcgttgaagggcaccctgggtctgttt
ggtgcaaggccggctacgcaattggcctcggagcttgaggtcatggcggggcaggccaaa
accacgtcctcatcttctacgctggaagctatgaagctgaagctggatcatttgaaaatt
cagattgaacaattattggcagctttgcgaaatcattcgatttga
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