Rhodoferax lithotrophicus: MIZ03_2816
Help
Entry
MIZ03_2816 CDS
T10289
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rlh Rhodoferax lithotrophicus
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rlh03009
]
MIZ03_2816
Enzymes [BR:
rlh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MIZ03_2816
Ribosome biogenesis [BR:
rlh03009
]
Prokaryotic type
ribosomal protein modification factors
MIZ03_2816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
BCO27924
UniProt:
A0ABN6D7A5
LinkDB
All DBs
Position
complement(2871563..2872966)
Genome browser
AA seq
467 aa
AA seq
DB search
MNQHISENAKSTSAPKVGFVSLGCAKALTDSELILTQLSAEGYQTVKTFAGADLVIVNTC
GFIDDAVKESLDTIGEALAENGKVIVTGCLGAKAGEGGSNLIRQMHPSVLAVTGPQATQE
VMDAVHANLPKPHDPFVDLIPNAFGSAGIKLTPRHYAYIKISEGCNHRCTFCIIPSMRGD
LVSRPIGDVLKEAQALFEGGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRLFELTQA
LGEMAQTYGAWVRLHYVYPYPSVDDILPLMASGLVLPYLDVPFQHSHPEVLKRMKRPASG
EKNLERLLRWREMCPEIVVRSTFITGFPGETESEFEHLLDFVREAQIDRAGCFAYSPVEG
AAANELPGMLPEVLREERRARFMEVAETVSSSKLQKRVGTTMQILVDAAPGLGKKGGLGR
SYADAPEIDGVVQLLAPEKISKTLRVGEFTKAKIVAARGHDLVAQPF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaacatatttcagaaaacgccaaatctacttcagctcccaaggtcggatttgtc
agtttggggtgcgcgaaagcgcttacggattcagagttgatattgacgcagttaagtgct
gaaggttatcaaaccgttaaaacctttgcaggtgctgacttggtgattgtcaacacctgt
ggcttcattgatgatgcggtcaaagaaagccttgacaccattggcgaggcgttggcagaa
aacggcaaggtcattgtgacgggctgtttgggagctaaagcgggtgagggtgggagtaac
ttgatacgtcaaatgcatcccagtgtgttggcggtcactggtccacaagccactcaagag
gtgatggatgcggtacatgccaacttgcccaaaccgcatgatccatttgtggatctgatt
ccgaatgcctttggctcggctggcatcaaactgaccccccggcactacgcgtacatcaaa
atcagcgaaggctgcaaccatcgctgcacgttttgcatcattccgtcgatgcgtggtgat
ttggtttcccgtccgattggagatgtgctcaaagaagcgcaagccttgtttgaaggcggt
gtcaaagagttgctggtgatcagtcaagatacttccgcttacggtgttgatgtgaaatat
cgcacgggtttctggaatgggaaaccgatcaaaacccgcttgtttgaattgacgcaagcc
ttgggtgagatggcgcaaacatatggagcttgggtgcgtttgcactatgtgtacccctat
ccaagtgtggatgacattttgccgctgatggcttcaggtcttgtgttgccgtatctggat
gtgccgtttcagcacagtcaccctgaggtgttaaaacgcatgaagcgtcctgccagtggt
gaaaaaaatctggagcgactgttacgttggcgtgaaatgtgtccagagattgtggttcgc
agcacgtttatcacaggttttccaggtgaaaccgaatctgagtttgagcatttgctggat
tttgtacgtgaagcacaaattgatagagcaggatgctttgcttacagccctgtcgagggt
gcagcggcgaacgaattgcctggcatgctccctgaggttttgcgtgaagagcgccgtgcc
cgtttcatggaggttgctgaaacggtgtcatccagtaaattgcaaaaacgggttgggaca
accatgcagattttggttgatgcagccccaggtttgggtaaaaaaggtgggttgggacga
tcttatgcagatgcgcctgaaattgatggtgtagtgcaattacttgcgcctgaaaaaatc
agcaagaccttgcgggtaggtgaattcaccaaggctaagattgtggctgcgcgtgggcat
gatctggtggcacaaccattctga
DBGET
integrated database retrieval system
