Rhodoferax lithotrophicus: MIZ03_3019
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Entry
MIZ03_3019 CDS
T10289
Name
(GenBank) acetoin catabolism regulatory protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rlh Rhodoferax lithotrophicus
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rlh03000
]
MIZ03_3019
Transcription factors [BR:
rlh03000
]
Prokaryotic type
Helix-turn-helix
Other families
MIZ03_3019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
AAA_5
HTH_30
HTH_23
HTH_28
AAA
Mg_chelatase
HTH_29
HTH_Tnp_ISL3
AAA_2
AAA_22
HTH_AsnC-type
HTH_50
AAA_16
HTH_7
IstB_IS21
HTH_AraC
IclR_C
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
BCO28122
UniProt:
A0ABM7MP90
LinkDB
All DBs
Position
complement(3085958..3087925)
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AA seq
655 aa
AA seq
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MQVHQQEHISRVTQMVAGGSSGHPEFASDSIIHDSWRRCARDYRLDPTRMQEAIILPSHR
LREHQDRMDEFLQIARDGMQALYQHVAELDYVVLLTDARGITVDFLGDLHTEHSLRRAGL
YLGSTWSESVAGTCGVGTCISTGQALTVHQGDHFDATHIPLTCTAAPVFDGRGQLNAVLD
ISALRSPQSKDSQHLALQMVTIYAQHIENASFLRQFRHDWLLRLSPSPQFLEVNPDYLLA
LDAAGRVIGYNRRAQLLLQDQVAGPLMGAAFERLFNLQLGDLGRFIYSSPADRCAITVAG
TSQQLFLLATPPRAAARPAPSAAAKPVPTPLAGLCGGDPALTRQIARAARFVNSPIGLLL
TGETGSGKEFFAKALHASSERRGRPFVAVNCAAIPEALAESELFGYLPGSFSGAGTRAKR
GLVQEADGGTLFLDEIGDMTLALQARLLRVLAEREVLSVGATRPVPVNIRVIAATHCDLE
ALVREGRFRADLYYRLNGAHLVLPPLRERTDLCWLIERLLANPRNGDEAAATVLSPDARA
RLLAHHWPGNLRELHNVIAYARSLCNQGRIELHDLPDHLSGTPAPKPLAVPSASLPAAPA
APTSEAAQLLQHLVASRWNVAEAARRMGLSRMTLYRRMQRWGLASPNQRDGDPTR
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgcatcagcaggagcacatctcaagggtcacgcagatggttgctggcggcagc
agcggccatccagagtttgcaagcgatagcatcattcacgattcgtggcgtcggtgcgca
cgggactatcggcttgacccaacccgcatgcaggaagccatcattctgcccagtcatcgc
ctgcgcgaacaccaggatcggatggacgagtttttgcagattgcgcgcgatggcatgcag
gcgctctatcagcatgtggccgagctggactatgtggtgctgctgaccgacgcgcgcggc
atcaccgtcgattttctcggcgacctgcataccgagcactcgctgcgccgcgccggcctg
tacctgggttcgacctggagcgaatcagtggccggcacctgcggcgtgggcacctgcatc
agcaccgggcaagccctcacggtgcaccagggcgaccatttcgacgccacccacatcccg
ctcacctgcacggccgcgccggtgttcgacggacgcggccagctcaatgcggtgctggac
atctcggcgctgcgctcgccacagagcaaggacagccagcacctcgcgttgcagatggtg
acgatctacgcccagcacattgaaaacgccagcttcctgcgccagtttcgccatgactgg
ttgctgcgcctgtcgccctcgccgcagtttctggaggtcaaccctgactacctgttggcg
ctggacgcggcgggccgggtcatcggctacaaccgccgcgcgcaactgctgctgcaggat
caggtggccggaccgctgatgggcgctgccttcgagcgcctgttcaacctccagcttggc
gacttgggtcgcttcatctacagcagcccggcggaccgttgcgccatcaccgtggctggc
accagccagcagctgttcctgctggcaacgccgccccgcgccgccgcgcgtcctgcgcca
tcggccgccgccaaacccgtgccaacgccgctggctggactgtgcggtggcgaccccgcg
ctgacgcggcagattgcacgcgcggcacgttttgtgaattcgcccatcgggctgctgctg
actggcgaaaccggcagcggcaaggagttcttcgccaaggcgctgcacgccagcagcgag
cggcgcggtcggcccttcgtggcggtgaactgcgcggccattcccgaggcgctggccgag
agcgagctgttcggctacctgcccggcagcttctcgggtgcgggcacacgtgccaagcgc
ggcctggtacaggaggccgatggcggcacgctgttcctcgatgagatcggcgacatgacg
ctagcgctgcaagcccggttgctgcgcgtgctggctgagcgcgaagtgctgtcggtgggc
gcgacgcggccggtgccggtgaacatccgcgtgatcgcggccacacactgcgatctggag
gcgctggtacgcgaggggcgctttcgcgccgacctgtattaccgcctgaacggcgcgcac
ctggtgctgccgccgctgcgcgagcgcaccgatctgtgctggctgatagagcgcctgctg
gcgaatccacgcaatggcgatgaagcagccgccacggtgctttcccctgacgcccgcgcc
cgcctgctggcgcaccactggccgggcaacctgcgtgagttgcacaacgtgatcgcgtac
gcccgcagcctgtgcaaccagggccggatcgaactgcacgacctgcccgaccacttgagt
ggcacgcctgcccccaaaccccttgctgtgccctccgcaagcttgcccgccgcacccgcc
gcgcccaccagcgaggcggcgcaattgctgcagcacctggtcgccagccgctggaatgtg
gccgaggcagcgcgccgcatgggcctgtcgcgcatgacgctgtaccgccgcatgcagcga
tggggccttgcctcgccgaaccagcgcgacggcgacccaacccgctga
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