Rhodoferax lithotrophicus: MIZ03_3108
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Entry
MIZ03_3108 CDS
T10289
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
rlh Rhodoferax lithotrophicus
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlh03032
]
MIZ03_3108
03036 Chromosome and associated proteins [BR:
rlh03036
]
MIZ03_3108
03400 DNA repair and recombination proteins [BR:
rlh03400
]
MIZ03_3108
DNA replication proteins [BR:
rlh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MIZ03_3108
Chromosome and associated proteins [BR:
rlh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MIZ03_3108
DNA repair and recombination proteins [BR:
rlh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MIZ03_3108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BCO28208
UniProt:
A0ABM7MPG4
LinkDB
All DBs
Position
complement(3188632..3188916)
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AA seq
94 aa
AA seq
DB search
MRFFVNKSELIDYIATNADMSKASAARALESTIEAVKTTLKNGGSVSLVGFGTFAAGKRA
ARVGRNPRTGTSIKISAAKVPKFRPGKALKDALN
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttttttgtgaataaaagtgagttgattgattacattgctacaaatgctgatatg
tcgaaggcttctgctgcgcgtgcgttagagtcgacgattgaagctgttaaaaccaccttg
aagaatggtgggtctgtttcattggtgggttttggcacatttgcagcgggtaaacgtgct
gcgagagttggtcgtaatccgcgtactgggacatcgattaaaataagcgctgctaaagtt
cccaagttccgtccaggtaaagcattaaaagatgctttaaattaa
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