Rhodoferax lithotrophicus: MIZ03_3277
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Entry
MIZ03_3277 CDS
T10289
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00450
Selenocompound metabolism
rlh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
MIZ03_3277
Enzymes [BR:
rlh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
MIZ03_3277
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
MIZ03_3277
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BCO28377
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Position
complement(3362565..3364526)
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AA seq
653 aa
AA seq
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MSSAFSLPTGASPSLAPPIDPALIASMASALFGAFPGEQARAAGVQTPVNIAPAGSPLVS
PAGFGPGVPGTPVPQGLVPGANLIPASPTPLASLAHRAPALALHAQAGNGLPDNVVTQLP
AYEPRFGSGVLGVPEASGASASEASRSPLANASPFYFLSEGYGHPSAGGLPMTSPISDGF
AQTDFAPEAARSAPAPSGGAAPVPAGVISSEPKYYFVDSVVLPNGYVTPAKAASGATTSV
ADKDRHPPFDVNAIRRDFPILQERVNGKQLVWFDNAATTQKPQSVIDRLAYFYAHENSNI
HRAAHELAARATDAYESAREKVRAFINAPDVNEVIFVRGTTEAINLVAKSWGGQHIQEGD
EIIVSNLEHHANIVPWQQLASAKGAKLRVIPVDDSGQVLLDEYAKLLNDRTKIVSVTQVS
NALGTVVPVKQIVEMAHRAGAIALVDGAQSVSHMPIDVQDIGADFFVFSGHKVFGPTGIG
ALWGKRAVLEDMPPWQGGGNMIADVTFEKTVFQPIPNKFEAGTGNIADAVGLGAAIDYVT
RIGMHNIDRYEHELLAYGMQQLATIPGVRLVGTAQDKASVMSFVLAGYSTDEVGKALNKE
GIAVRTGHHCAQPILRRMGLETTVRPSLAFYNTFDEVDQLVAVVRRLAAARVH
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgctttctccctacctacaggggcttcgccaagcttggcaccaccgattgac
ccggccttgatcgccagcatggcatctgccctgtttggcgcatttcccggtgagcaggcg
cgtgcggctggcgtgcaaacgccggtcaacatcgcgcccgccggttcaccactggtgagc
ccggctggctttggccccggtgtgcccggcacacctgttccacaaggtttggtgcccggt
gccaacctgattccggcatcgcccacaccgctggcttcactggcgcaccgtgcaccggct
ttggctctccatgcgcaggctggcaatggcctgccagacaacgtggtcacgcaattgccc
gcctacgagccgcgtttcggcagcggcgtgctgggtgtgcctgaagcctcgggtgcctcg
gcatctgaagccagtcgctcaccgcttgccaacgcctcgccattttacttcttgagtgag
ggttatggtcacccgtccgccggtggtttgccgatgacatcgcccattagcgacggtttt
gcgcagaccgactttgcaccagaggcagctcgttcagcgccagccccttcgggtggcgcg
gcccctgtgccagcgggtgtgatctcatccgagcccaagtactactttgtcgattcggtg
gtcttgcccaatggctatgtcacccccgccaaagctgcgtcaggcgctactacttctgta
gctgacaaagatcggcatccgccctttgatgtgaacgctatccggcgcgatttccccatc
ctgcaagagcgcgtgaatggcaaacagctggtgtggttcgacaacgccgccaccacgcaa
aaacctcagtcagtgattgaccggttggcctatttttacgcccacgagaactccaacatc
caccgcgctgcccacgagctggcggcccgcgccaccgatgcgtatgagagcgcacgtgaa
aaagtgcgggccttcatcaacgcgccagatgtgaatgaagtgatctttgtgcgcggcacc
accgaggccatcaacctggtggccaagagctggggcggccaacacattcaggaaggtgac
gagatcatcgtttccaacctggagcaccacgccaacatcgtgccgtggcaacaactggca
tctgccaaaggggccaagctgcgcgtgatcccggtggacgactcgggccaggtgctgctg
gacgaatacgccaagttgctcaatgaccgcaccaaaatcgtctcggtcacgcaagtgtcc
aacgcgttgggaaccgtcgtgccggtgaagcaaatcgtcgagatggcgcatcgcgcaggc
gcgattgctctggtggacggcgcgcagtcggtgtcgcacatgccgattgatgtgcaagac
atcggcgcggacttctttgtgttctccggccacaaggtgtttggcccgaccggcattggt
gccttgtggggcaaacgtgcggtgctggaagacatgccaccctggcaaggcggcggcaac
atgattgccgatgtgacgtttgagaaaaccgtgttccagcccatccccaacaagtttgag
gcgggcaccggcaacatcgctgacgcggtgggcctgggcgcggcgattgactacgtgacc
cgcatcggcatgcacaacatcgaccgctacgagcacgagctgctggcctacggcatgcaa
cagctcgccaccatccccggtgtgcggctggtgggtacggcccaggacaaagccagtgtg
atgtccttcgtgctggctggctacagcaccgacgaggtgggcaaggcgctcaacaaggag
ggtattgccgtgcgcaccggtcaccactgcgcccagccgatcctgcggcgcatgggcctg
gagaccacggtgcggccttcactggcgttctacaacacctttgatgaagttgaccagctg
gtggcggtggtgcggcgcttggccgcggcgcgagtgcactga
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