Rhodoferax lithotrophicus: MIZ03_3294
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Entry
MIZ03_3294 CDS
T10289
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
rlh Rhodoferax lithotrophicus
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rlh03009
]
MIZ03_3294
Ribosome biogenesis [BR:
rlh03009
]
Prokaryotic type
ribosomal protein modification factors
MIZ03_3294
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
BCO28394
UniProt:
A0ABM7MQ33
LinkDB
All DBs
Position
complement(3377374..3379578)
Genome browser
AA seq
734 aa
AA seq
DB search
MEIKVNFLDKLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRHIPTENIRLSQNNIVDPENRYQQIFKIQVELPAELSAKDRQGILRSIDRCTVKKVVQA
GPEFVIEEVENLDADAQALLSLAPTSEASTYIAGKDLPLEQTITNMSAVLAGLGIKIEIA
SWRNLVPNVWSLHIRDAHSPMCFTNGKGSTKESALASALGEYIERLNNNHFYAGVFWGED
IANAAFVHYPNERWFKPGKRDALPSGLLDAYCRKIYDPDGELRGSHLIDTNSGNVQRGIC
ALPFVRHSDGAVVYFPSNLIENLFVSNGMSAGNTLMEAQVQCLSEIFERAVKREILEGEI
ALPDVPDHVLAKYPGILAGIKGLEEQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPRPTFTSNAVTEPNNFVEHFIDSSGVVSWRF
FSAKADFDFVEWDFSGKGDNSNADEAATLFGILKDIGKEVYMAVYDQLGATACRILVPGY
SEVYPVEDLIWDNTNKALLFRADILNLHRLDDANLEALLERLENNELDEYSDIATLIGIE
FDENTAWGQLTVLELKLLIQLALKQYEVAQELVGAFLQYNDNTVERGLFYQALNVVLEVL
LDDDLELDDYVVNFRRMFGNPRMDAVLGSVDGSVRFFGLTPTSMKLEGLDRHQRLIDSYN
KLHTARASVAATSS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaaagtcaactttctcgacaagcttcgtcttgaagccaagttcgatgacttc
acggtggtcgccgaccagcctattcgctacaaaggcgatggctcggcaccagggccgttc
gattactttctggcctcatcggccttgtgtgcggcttactttgtcaagttgtattgcgac
acccgccatattcctaccgagaacatccggctgtcgcagaacaacatcgttgatccagaa
aaccgctatcagcagattttcaagattcaggtcgagctgccggcggaactctcggccaaa
gaccgccaaggcattttgcgttccatcgaccgttgtacggtgaaaaaagtggtgcaagcg
gggcctgagtttgtgattgaggaagtggaaaacctggatgccgatgcccaggccttgctg
agcctggccccgacttcagaagcaagcacctatatcgccggcaaggatctgccgctggag
caaaccatcaccaatatgtcggctgtgttggcgggcttgggtatcaagatcgaaatcgct
tcgtggcgcaatctggttcccaatgtgtggtcgctgcatatccgcgacgcacattcgccg
atgtgttttaccaatggcaaggggtcgaccaaggaaagtgcattggcctccgccttgggc
gaatacattgagcgcctcaacaacaaccatttttacgccggtgtattttggggcgaagac
atcgccaacgcagcgtttgtccattacccgaacgagcgctggttcaagccgggcaagaga
gatgcgctgccgtcgggactgctggatgcgtactgccggaaaatttacgatcccgatggc
gaactgcgtggttcacatctgattgacaccaactccggcaatgtgcagcgcggtatttgt
gcgctgccctttgtgcgccattcggatggcgcggtggtgtatttcccgtccaacctgatc
gaaaacctgtttgtgagcaatggcatgagtgccggcaatacgctgatggaggcacaggtg
caatgcctgtcggagattttcgaacgggcggtcaaacgcgagattctggaaggtgaaatc
gccttgccagatgtgcccgaccacgtgctggcgaagtaccctggcattctggccggcatc
aagggactggaagagcaaggctttccagtgctggtgaaggacgcgtcgctgggcggggtg
tacccggtgatgtgcgtcaccttgatgaacccgcgcacgggcggtgtgtttgcctcgttc
ggcgcgcaccccagcctggaggtggcgctggaacgtagtctgacggaattgctgcagggt
cgcagttttgaaggcctgaacgatttacctcggcccacctttaccagcaacgccgtgacg
gagcccaacaactttgtcgaacactttattgattccagcggtgtggtgtcgtggcggttt
ttcagtgccaaagcggattttgattttgtcgagtgggatttttccggcaagggggacaac
tccaatgccgacgaagccgcgaccttgttcggcattctcaaagacatcggcaaagaagtc
tacatggcggtgtatgaccagttaggcgccacggcctgccgcatcctggtgccgggttat
tcggaggtgtatccggtagaagacttgatctgggacaacaccaacaaagcactgttattc
cgagccgatattttgaacttgcatcgcctggacgatgccaacctggaagccctgctggag
cgtttggagaacaacgagctggacgagtactctgacattgccaccttgatcggcatcgag
tttgatgagaacacggcctggggccagctgaccgttctggagttgaagctgctgattcag
ctcgccttgaaacaatacgaggtggcgcaagagctggtgggagctttcctgcaatacaac
gacaacacggtcgagcgcggattgttctatcaggccttgaatgtggtgctggaggtgctg
ctggatgatgacctggaattggacgattacgtggtcaatttccgccgcatgtttggcaac
cctcggatggacgcggtgctggggtccgtggatggcagcgtgcgcttcttcggcttgaca
ccaacgagtatgaaactggaggggctcgacaggcaccagcgtctgatcgacagctacaac
aaattgcacacggcacgggccagtgtggcggctacttccagctag
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