Rhodoferax lithotrophicus: MIZ03_3419
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Entry
MIZ03_3419 CDS
T10289
Name
(GenBank) aspartate--tRNA(Asp/Asn) ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MIZ03_3419
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rlh01007
]
MIZ03_3419
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlh03016
]
MIZ03_3419
03029 Mitochondrial biogenesis [BR:
rlh03029
]
MIZ03_3419
Enzymes [BR:
rlh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
MIZ03_3419
Amino acid related enzymes [BR:
rlh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MIZ03_3419
Transfer RNA biogenesis [BR:
rlh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MIZ03_3419
Prokaryotic type
Other AARSs
MIZ03_3419
Mitochondrial biogenesis [BR:
rlh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
MIZ03_3419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BCO28513
LinkDB
All DBs
Position
complement(3503048..3504850)
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AA seq
600 aa
AA seq
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MAMRSHYCGLVTEALMGQAVTLCGWVNRRRDHGGVIFVDVRDREGYVQVVCDPDRADMFK
IAEDLRNEFCIQVKGLVRARPEGTVNDSLKSGKIEVLCHELTVLNPSVTPPFQLDEDNLS
ETTRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLTKSTPEGARDYL
VPSRVHDGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETS
FMTEEDIRDMFQGMIKTVFQNTLGVDLGVFPVMTYQEAAHRFGSDKPDLRVKLEFTELTD
VMADVDFKVFSTPATTKGGRVVALRVPGGAEISRGEIDNYGEFVKIYGAKGLAWIKVNDV
AQGREGLQSPIVKNLHDRAISEILARTGAQNGDILFFGADKEKIVNDAIGALRIKIGHSE
FGKKNGLFENRWAPLWVVDFPMFEYDEDSDRWMAVHHPFTAPKDGHEDLMVTDPGKCISK
GYDMVLNGWEMGGGSVRIHRADVQQKVFDALKITPEEAQLKFGFLLDALQYGAPPHGGLA
FGLDRIITLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRNADLVKAS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcgttctcattattgtggtctggtgactgaagccctgatgggccaagccgtg
actttgtgtggctgggttaaccgtagacgtgaccacggcggcgtgatttttgtggatgtg
cgtgaccgtgaaggttatgtgcaggtggtatgtgacccggatcgggccgacatgttcaag
attgccgaagacttgcgtaatgagttttgtattcaggtcaagggcctggtacgtgcccga
cccgaaggcacggtcaacgacagcctcaagagcggcaagattgaagtgttgtgccatgag
ctgacggtgctcaacccctctgtcacgcccccgttccaactcgatgaagacaacctgtcc
gagaccacccgcttgacgcaccgcgtgctggatttgcgccgcccttacatgcaaaacaac
ctgatgctgcgctaccgtgtggccatggaggtgcgcaagtttctggatgccaacggtttt
gtggacattgaaaccccgatgctgaccaagagcacaccggagggtgcgcgcgattacctg
gtgcccagccgtgtgcacgatggtcatttctttgcgctcccacaaagccctcaattgttc
aaacaacttttgatggtggccggatttgaccgctattaccagattaccaagtgtttccgt
gacgaagatctgcgtgctgatcgccagccagaattcactcaaatcgatattgaaacctcg
ttcatgaccgaggaagacattcgtgacatgtttcagggcatgatcaaaaccgtgttccag
aacaccctgggtgtcgatctgggggtattcccggtgatgacctatcaagaagcggcgcat
cgctttggttcggacaaacccgatttgcgcgtcaagctcgaattcaccgaactcaccgat
gtaatggccgatgtggacttcaaggtgttctccacccccgccactaccaaaggtgggcgt
gtggtggccttgcgcgtgccgggtggtgcagaaatcagccggggtgaaattgacaactac
ggcgaattcgtcaagatttacggcgccaagggtctggcctggatcaaggtcaatgacgtg
gcccagggccgtgaaggcttgcaaagcccgatcgtcaagaacctgcacgaccgcgctatt
agcgaaattctggcccgcaccggggcccaaaatggcgacatcctgttctttggtgccgac
aaggaaaagatcgtcaacgatgccattggggccttgcgcatcaagatcggccacagcgaa
tttggcaagaaaaatggtctgttcgagaaccgttgggcaccgctgtgggtggtggacttc
ccgatgtttgagtacgacgaagactcggaccgctggatggcggtgcaccaccccttcacc
gcacccaaggatgggcatgaagacttgatggtgaccgaccctggcaagtgtatttccaag
ggttacgacatggtgctgaatggctgggaaatgggtggtggttccgtgcgtatccaccgt
gccgatgtacagcaaaaggtgtttgatgcactgaagatcacgccggaagaagcacaactc
aaatttggcttcctgctggatgccttgcagtatggtgcgccgccgcatgggggtctggcc
tttggcttggatcgcatcattaccttgatgacgggtgcggaatccattcgcgacgtgatt
gccttcccgaaaacccagcgtgctcagtgtctgttgacccaagccccgtcaccggtggac
gagaaacaactgcgtgaattacatatccgcttgcgtaatgcggacctggtcaaggccagt
tga
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