Rhodoferax lithotrophicus: MIZ03_3489
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Entry
MIZ03_3489 CDS
T10289
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rlh Rhodoferax lithotrophicus
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlh03016
]
MIZ03_3489
Enzymes [BR:
rlh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MIZ03_3489
Transfer RNA biogenesis [BR:
rlh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MIZ03_3489
Prokaryotic type
MIZ03_3489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PD40
Motif
Other DBs
NCBI-ProteinID:
BCO28580
UniProt:
A0ABN6D9B8
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All DBs
Position
3577488..3578294
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AA seq
268 aa
AA seq
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MVQDRQDRVRLALGISYQGGHYQGWQSQSSGQTVQDQLEKALSQFADHRVSTLCAGRTDA
GVHGLMQVVHFDTPVNRPEASWVRGPNALLPRDIAVQWARHVPAEFHCRASALSRRYAYS
LLESPVRPSVEHGRVGWVHRPLNLELMQQAAARLLGEHDFTSFRASACQALSPVKHLMRI
DICRRGAYWRFEFEANAFLHHMIRNLMGCLLLVGDQRRPPEWISEVLAARDRDAAAPTFS
PDGLYFLGPCYAPHWGLPERTPLFDLLP
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaagaccggcaggaccgcgtgcgactggcgctgggcatcagctaccaagggggc
cattaccaaggctggcaaagccagtcgtccgggcaaacggtgcaagaccagcttgaaaaa
gccctgagccaatttgccgaccaccgtgtctccaccctgtgcgccggccgcaccgatgcc
ggggtgcatggtctgatgcaggtggtgcacttcgacaccccggtgaaccgccccgaggcc
tcctgggtgcgcgggcccaacgccctgctgccgcgtgacattgcggtgcaatgggcccgg
catgttccggcagaatttcactgccgcgccagcgccctgtcacgccgttacgcctacagc
ctgctcgaatccccggtgcgccccagcgtggaacatggccgggtcggctgggtacatcgt
ccgttgaacctcgaattgatgcaacaagccgccgcccggctgctgggtgaacacgatttc
acctcgtttcgcgccagcgcctgccaggccttgtcaccggtcaaacacctgatgcgcatc
gacatctgccgccgcggggcctactggcgctttgaatttgaagccaatgcgtttttgcac
cacatgatccgcaacctgatgggttgcctgctgctcgttggcgaccaacgccgcccaccc
gagtggatcagcgaggtgctggcggcgcgtgaccgtgatgccgcggcccccacgttttcg
cccgacgggctgtactttttaggcccctgctatgccccgcattggggcctgccagagcgc
accccactttttgacctgctgccatga
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